| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0626 |
|---|
| Symbol | tnaA |
|---|
| ID | 8089033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 706768 |
|---|
| End bp | 708168 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834698 |
|---|
| Product | tryptophanase |
|---|
| Protein accession | YP_002986259 |
|---|
| Protein GI | 242238078 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3033] Tryptophanase |
|---|
| TIGRFAM ID | [TIGR02617] tryptophanase, leader peptide-associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.287834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA TTCCCGAGCC TTTTCGCATC AAAATGGTGG AAAACATCCG CATGACATCC
CGCGCCGAAC GTGAACACGC GCTACAGGAC GCGGGCTACA ACCCGTTTCT GCTGCGCAGC
GAAGATGTCT ATATCGACCT GCTGACCGAT TCCGGCACCG GCGCGATGAG CGACCGTCAA
TGGGCAGGCC TGATGATGGG GGACGAAGCC TACGCCGGTT CACGCAACTA TTACCACTTA
TGCGATCAGG TGAAATCGCT GTTGGGCTAC CCCTTTACCA TCCCGACCCA TCAGGGACGT
GGCGCAGAAC AGATCCTGTT TCCCTGCCTG CTGGCGAAAA AACGCCGGGA AGGCGGCGGA
CAAAAGCCGG TCTTCATCTC TAATTTTCAT TTTGATACCA CCGCCGCCCA CGTCGAAATG
ACCGGCGCAC GCGCCATCAA CGTCGTCACG CCGAAAGCAT TCGACACCAC CACCTATTAC
GACTGGAAAG GCGATTTCGA TCTCGATCTA CTGCAATCGG CCATCGAACA GCACGGCCCG
GAAAATGTGG TCGCCATCAT CACCACGGTG ACGTGCAACA GCTCCGGCGG CCAGCCGGTT
TCCATGAGCA ATATGCGCGA GGTCTACCGT ATTGCGCAGC AGCACCGGAT CCCGGTCGTG
ATCGACTCCG CCCGTTTCTG CGAAAATGCC TGGTTTATCA AACAGCGCGA AGCGGGTTAT
CAGCAACGGA GCATCAAAGA CATCATTTAC GAGATGTATC AGTACGGCGA TATGCTCACC
ATGTCGGCGA AGAAGGATCC GATGGTGAAC ATCGGCGGCC TGTGCTGTTT TCGCAGCGAC
GAAGATCTGT ACAACGACGT GCGGGTGCGC TGCGTGCCGC TGGAAGGGTT CGTCACCTAT
GGCGGGCTGG CCGGGCGTGA TATGGAAGCG CTGGCCATCG GTCTGGAAGA GGGCACCAAT
GAAGACTTTC TCACCTATCG TATCGGTCAG GTGACTTACC TCGGCGAACG CCTGAAAGCG
GCCGGTATCC CGATTCAGTA CCCGGTGGGC GGGCACGCGG TGTTCGTCGA TGCGAAAAAA
TTGCTGCCCC ATATTCCGCC GGAACAATTC CCGGCGCAGG CGCTGAACAA CGCGCTCTAT
CTGGAGGCAG GGATCCGCAG CGTGGAGATC GGTTCGCTAC TGCTGGGGCG CGACCCGGAC
ACCGGCAAGC AAAAACCGTC TCCGCTGGAG TTACTGCGGT TAACTATCCC CCGCCGGGTC
TACACCAATG ACCATATGGA CTACATCGCC GATGCATTAA TTGCGCTGAA AGCCCAGGCG
CATGACATCA AAGGCCTGAC GTTCACCTAC GAACCGCCGG TGTTGCGCCA TTTCGTGGCT
AAACTCAAAC CGGTGGAGTA A
|
|---|
| Protein sequence | MKRIPEPFRI KMVENIRMTS RAEREHALQD AGYNPFLLRS EDVYIDLLTD SGTGAMSDRQ
WAGLMMGDEA YAGSRNYYHL CDQVKSLLGY PFTIPTHQGR GAEQILFPCL LAKKRREGGG
QKPVFISNFH FDTTAAHVEM TGARAINVVT PKAFDTTTYY DWKGDFDLDL LQSAIEQHGP
ENVVAIITTV TCNSSGGQPV SMSNMREVYR IAQQHRIPVV IDSARFCENA WFIKQREAGY
QQRSIKDIIY EMYQYGDMLT MSAKKDPMVN IGGLCCFRSD EDLYNDVRVR CVPLEGFVTY
GGLAGRDMEA LAIGLEEGTN EDFLTYRIGQ VTYLGERLKA AGIPIQYPVG GHAVFVDAKK
LLPHIPPEQF PAQALNNALY LEAGIRSVEI GSLLLGRDPD TGKQKPSPLE LLRLTIPRRV
YTNDHMDYIA DALIALKAQA HDIKGLTFTY EPPVLRHFVA KLKPVE
|
|---|
| |