| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0607 |
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| Symbol | |
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| ID | 8089014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 683230 |
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| End bp | 683883 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644834679 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002986240 |
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| Protein GI | 242238059 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.189271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTT ACAATCCTCC GCGCGATCCC TGGCTACATG TTCTGTATCA GGATCAACAC
ATCATTGTGG TCAATAAACC CAGCGGATTG CTGTCGGTGC CTGGTCGCGC CGACGAGCAT
AAAGACAGCA TCATGAGCCG GATCCAGGCC GACATCCCGA CGGCCGAATC CGTACATCGT
CTGGATATGG CGACCAGCGG CGTCATGGTC GTGGCGTTGA CCAAAGCCGC CGAGCGCGAA
CTGAAACGCC AGTTCCGCGA GCGCGAACCG AAGAAATCGT ACCTTGCCCG CGTATGGGGA
CATATGGCGC AGGATGAAGG GCTGGTGGAT CTGCCGTTGA TCTGTGACTG GCCCAACCGC
CCACGCCAGA AAGTCTGCTT CGAACAGGGG AAACCGGCGC AAACCGCCTA CCAGGTGCTT
GCACGCGACG CCGATGGCAC CACCCGCGTG AAGCTGATGC CGATAACCGG CCGCTCCCAT
CAGCTACGGG TGCATATGCT GGCGTTGGGA CATCCTATTC TGGGAGATGG TTTCTATGCC
CACCCCGACG CCAAAGCCAT GGCGCCCCGC CTGCTGCTGC ACGCGCAGGA GCTGGTCATC
ACCCATCCGG CATTTCATAC GCCGATGCAT TTTCGCTGCG AAGCGGATTT CTGA
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| Protein sequence | MEPYNPPRDP WLHVLYQDQH IIVVNKPSGL LSVPGRADEH KDSIMSRIQA DIPTAESVHR
LDMATSGVMV VALTKAAERE LKRQFREREP KKSYLARVWG HMAQDEGLVD LPLICDWPNR
PRQKVCFEQG KPAQTAYQVL ARDADGTTRV KLMPITGRSH QLRVHMLALG HPILGDGFYA
HPDAKAMAPR LLLHAQELVI THPAFHTPMH FRCEADF
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