Gene Dd703_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0596 
Symbol 
ID8089003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp672332 
End bp673024 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID644834668 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002986229 
Protein GI242238048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.400455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGAA AGCATGCCAT CGGCGCTATT ATGCCCACGT TTTTTTGCCC GTTCTTTGAT 
TGCCATACTG AATACATCAT GCTTGAGACT TCTTTATTTG TTGCCACCAT CGCCATGCTG
GGGATGCTTT CTCCCGGCCC GGACTTTTTT CTGGTGATAA AAAACGCCGC GCGTTACCCC
CGTCTGGCCG CCATGATGAC GGCAGCAGGC GTCATCTGCG GCGTCGCTAC CCATATGGCT
TACTGTGTTG CCGGCCTGGC TGTCGTGATC ACCACCACGC CATGGCTGTT CAGCCTGCTG
AAATATGTCG GTGCGGTTTA TTTGATTTGG CTAGGCATTC AGGCGCTGCG CGCTCGCGGC
AGCGGAAAAT TGAATATCGC CGGCCTGCCG CGCCAGAGCG TCAGCCTGCG CAACGCCTTC
ATGCAGGGTT ATCTCTGTAA CCTGCTCAAC CCCAAGGCCA CGCTATTCTT TCTGGCTATT
TTCACTCAGG TGTTGAACCT TGATTCCAGC TTCGGCGAAA AGCTGTGGTA CGCCGGGATC
ATCTGGGGGC TGACGCTGTG CTGGTGGCCG CTACTGGTCA TCCTGATTCA GAGTGAACCC
GTGCGGCGCG GCATGACTAA GGCCCAAACG CTGCTCGACA AAGTGCTGGG CGGCGTACTC
ATCACGCTGG GCATCAAGGT TGCGTTGAGT TAA
 
Protein sequence
MVRKHAIGAI MPTFFCPFFD CHTEYIMLET SLFVATIAML GMLSPGPDFF LVIKNAARYP 
RLAAMMTAAG VICGVATHMA YCVAGLAVVI TTTPWLFSLL KYVGAVYLIW LGIQALRARG
SGKLNIAGLP RQSVSLRNAF MQGYLCNLLN PKATLFFLAI FTQVLNLDSS FGEKLWYAGI
IWGLTLCWWP LLVILIQSEP VRRGMTKAQT LLDKVLGGVL ITLGIKVALS