| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0563 |
|---|
| Symbol | |
|---|
| ID | 8088970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 631745 |
|---|
| End bp | 633463 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644834635 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_002986196 |
|---|
| Protein GI | 242238015 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.499297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTAT GGCATAACGC TAAACCGGAC AGACAGAAAG AGGCTCAGAG CAACGTGGCT
CAATACGTTT ACACTATGCA TCGCGTCGGT AAAGTCGTAC CACCGAAGCG TCATATTCTG
AAAAATATCT CCCTTAGTTT CTTTCCAGGC GCCAAAATCG GCGTTTTGGG CCTTAATGGC
GCAGGTAAAT CCACTTTGCT GCGCATTATG GCCGGCATCG ATAAAGACAT CGAAGGCGAG
GCCCGCCCGC AGCCGGGCAT CAAAATCGGC TACCTGCCCC AGGAACCGCA ACTGAATCTG
GAACAGACTG TTCGGGAAAC CATAGAAGAA GCCGTTTCAG AAGTAAAAAA TGCGCTGACT
CGTTTGGATG AAGTCTATGC GGCCTATGCG GATCCGGAAG CAGATTTTGA CAAACTGGCC
AAAGAACAGG GTGAATTAGA AGCCATCATC CAGGCCCATG ATGGGCATAA TCTGGATAAC
CAACTTGAGC GTGCCGCAGA TGCACTGCGT TTGCCCCCAT GGGATGCAAA AATCGCCCAC
CTGTCTGGTG GTGAACGCCG TCGTGTCGCT ATCTGCCGTC TGCTGCTGGA AAAACCGGAT
ATGCTGCTGC TAGACGAACC GACCAACCAT CTGGATGCCG AATCCGTCGC CTGGCTGGAA
CGCTTCCTGC ACGATTACGA AGGAACCGTC GTGGCCATCA CCCATGACCG CTATTTCCTC
GACAACGTCG CCGGTTGGAT TCTTGAGCTG GATCGCGGCG AAGGCATTCC CTGGGAAGGT
AACTATTCAT CCTGGCTGGA GCAGAAGGAT CAGCGTCTGG CGCAGGAGGC CGCGTCTGAG
GCAGCTCGCC GCAAGTCCAT CGAAAAAGAA CTGGAGTGGG TTCGCCAGAA TCCGAAAGGG
CGTCAGGCCA AAGGCAAGGC CCGTCTTGCA CGCTTTGATG AACTCAACAA CGTCGAATAT
CAAAAACGCA ATGAAACCAG TGAATTGTTC ATTCCACCCG GTCCCCGCTT GGGCGATAAG
GTGCTGGAAG TGGCGGCACT GACTAAATCC TACGGCGACC GGGTGCTGAT CGATAACCTG
TCGTTCAACA TCCCGAAAGG CGCCATCGTC GGTATCATCG GCCCTAACGG TGCGGGTAAA
TCCACCCTGT TCCGTCTGTT GTCCGGTCAG GAACAACCGG ACGCCGGCAC GATGACACTC
GGCGACACTG TCCAGTTGGC TTCGGTTGAT CAGTTCCGCG ACAGTATGGA CAACAACAAA
ACCGTGTGGG AAGAGGTGTC AGGCGGGCAA GACATCATGC GGATCGGCAA CTTTGAAATC
CCGAGCCGGG CTTATGTCGG TCGGTTCAAC TTTAAAGGTG TGGATCAAGG TAAGCGTATC
GGCGAGCTTT CAGGCGGTGA ACGCGGTCGC GTACATCTGG CGAAACTGCT GCAGGTTGGC
GGCAACATGT TGCTGCTCGA CGAACCGACT AACGACCTGG ATATCGAAAC ATTGCGAGCG
CTGGAAAACG CCCTGCTGGA ATTCCCTGGC TGTGCGATGG TCATCTCCCA TGACCGCTGG
TTCCTGGATC GAATCGCCAC ACACATCATC GATTATCAGG ATGAAGGCAG AGTGGAGTTC
TTTGAAGGCA ACTTCACAGA ATATGAAGAA TATAAAAAGC GTACTTTGGG TGCGGAGGCA
TTAGAACCTC ACCGTATCAA ATACAAGAGG ATGGCCTGA
|
|---|
| Protein sequence | MLLWHNAKPD RQKEAQSNVA QYVYTMHRVG KVVPPKRHIL KNISLSFFPG AKIGVLGLNG
AGKSTLLRIM AGIDKDIEGE ARPQPGIKIG YLPQEPQLNL EQTVRETIEE AVSEVKNALT
RLDEVYAAYA DPEADFDKLA KEQGELEAII QAHDGHNLDN QLERAADALR LPPWDAKIAH
LSGGERRRVA ICRLLLEKPD MLLLDEPTNH LDAESVAWLE RFLHDYEGTV VAITHDRYFL
DNVAGWILEL DRGEGIPWEG NYSSWLEQKD QRLAQEAASE AARRKSIEKE LEWVRQNPKG
RQAKGKARLA RFDELNNVEY QKRNETSELF IPPGPRLGDK VLEVAALTKS YGDRVLIDNL
SFNIPKGAIV GIIGPNGAGK STLFRLLSGQ EQPDAGTMTL GDTVQLASVD QFRDSMDNNK
TVWEEVSGGQ DIMRIGNFEI PSRAYVGRFN FKGVDQGKRI GELSGGERGR VHLAKLLQVG
GNMLLLDEPT NDLDIETLRA LENALLEFPG CAMVISHDRW FLDRIATHII DYQDEGRVEF
FEGNFTEYEE YKKRTLGAEA LEPHRIKYKR MA
|
|---|
| |