Gene Dd703_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0553 
Symbol 
ID8088879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp619893 
End bp620909 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content54% 
IMG OID644834625 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_002986186 
Protein GI242238005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.896247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCC GTATTGCGAT AAACGGTTTT GGCCGCATTG GCCGCAGCGT ACTGCGGGCA 
TTGTACGAGT CCGGTCGGCG GGCCGAAATG GCGGTGGTGG CGATCAATGA GCTGGCCAGC 
GCCGAAGGTA TTGCCCATCT GCTTAAATAT GACAGCAGCC ACGGTCGTTT CTCATGGGAT 
GTACGTCAGG AGTGCGATCG GTTGTCGGTC GGCGACGATA CGATCCGTTT GTTACATCAG 
GCGGATATTC ATGCGTTGCC CTGGAAAGAG TTGGGTGTCG ATGTGGTGCT GGATTGCAGT 
GGTGTATACG GCAGTCGGGC GGACGGCGAG GCCCATTTGG CCGCCGGTGC TAAAAAAGTG 
CTGTTTTCAC ATCCAGGAGC GCCGGATTTG GATGCCACCG TCGTATACGG CGTTAACCAT 
GCCGATTTGC TATCGACGCA TCGTCTGGTG TCCAACGCTT CCTGTACCAC CAATTGCATC 
ATACCGATCA TCAAGCTGTT GGATGACTCG TTTGATATAG AAAGCGGTAC TGTTACGACG 
ATTCATGCCT CCATGAACGA TCAACCGGTA ATTGATGCCT ATCATCATGA TTTGCGCCGT 
ACCCGGGCGG CAAGCCAGTC CATCATTCCG GTGGATACCA AGCTGGCGGT GGGGATTACG 
CGATTTTTTC CGAAGTTTGC TGACCGTTTC GAGGCCATTT CCGTGCGGGT GCCGACCATT 
AACGTGACGG CCATCGACTT GAGCGTTAGC GTGAAAAAAG CGGTAAACGT GAATGAAATC 
AATACACTTT TCCGTCAGTC AGCGCAGGAT GCATTTCGTG GTATAGTTGA CTATACCGAA 
TTACCGCTGG TTTCCGCGGA TTTTAACCAC GATCCCCATA GCGCGATTGT GGATGGCACG 
CAAACCCGGG TCAGCGGCCA GCATCTGGTT AAAACGCTGG TCTGGTGTGA TAACGAATGG 
GGCTTTGCCA ACCGGATGTT GGACACAACA CAGGCAATGG CGGCCTGCGG TTTCTGA
 
Protein sequence
MAIRIAINGF GRIGRSVLRA LYESGRRAEM AVVAINELAS AEGIAHLLKY DSSHGRFSWD 
VRQECDRLSV GDDTIRLLHQ ADIHALPWKE LGVDVVLDCS GVYGSRADGE AHLAAGAKKV 
LFSHPGAPDL DATVVYGVNH ADLLSTHRLV SNASCTTNCI IPIIKLLDDS FDIESGTVTT 
IHASMNDQPV IDAYHHDLRR TRAASQSIIP VDTKLAVGIT RFFPKFADRF EAISVRVPTI 
NVTAIDLSVS VKKAVNVNEI NTLFRQSAQD AFRGIVDYTE LPLVSADFNH DPHSAIVDGT 
QTRVSGQHLV KTLVWCDNEW GFANRMLDTT QAMAACGF