| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0550 |
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| Symbol | |
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| ID | 8088876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 613400 |
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| End bp | 615373 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644834622 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002986183 |
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| Protein GI | 242238002 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.314322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG ATATGATCCA CTGCTCGTCG ATGGCGGGTA AATACGATAC TTCTCGCTCC
ATGCAGGAGG TAGCCATGAA TGACCGTGAC GCCAGTGAAA TGCTTCGTAC TTACAATATT
GCCTGGTGGG GCAATAACTA TTACGACGTC AACGAGTTGG GACACATCAG CGTGTGTCCT
GATCCGGATG TACCGGAAGC GCGGGTCGAT TTGGCTGAAC TGGTCAAAGA ACGGCAACAG
GATAATCAGC GTCTGCCTGC GCTGTTCTGT TTTCCGCAGA TCCTTCAGCA CCGGCTGCGC
TCCATTAATG CGGCGTTCCG TCGCGCCCGC GAGTCTTTCG GTTACGAGGG CGGCTATTTT
CTGGTGTACC CCATCAAGGT CAATCAGCAT CGTCGGGTTA TCGAAGCACT GGTCAATTCC
GGTGAGCCGT TAGGGCTGGA AGCGGGTTCC AAAGCTGAGC TGATGGCCGT GCTTGCTCAT
GCGGGCATGA CCCGTACCGT GATCGTCTGC AACGGTTACA AGGATCGTGA ATACATCCGG
CTGGCGCTGA TTGGTGAAAA AATCGGGCAC AAGGTTTATC TGGTTATCGA GAAGATGACC
GAAATCAAGT TGGTGCTGGA AGAAGCCGAG CGGCTGAATG TGGTGCCTCG TCTGGGAGTG
CGCGCCCGTC TGGCGTCGCA GGGCTCCGGC AAATGGCAGT CCAGCGGCGG CGAAAAATCC
AAGTTCGGTC TGGCCGCGGC GCAGGTGTTG CATTTAGTGG AACTGCTGCG TCAGGCCAAC
CGCCTCGACA GCCTGCAACT GCTGCACTTC CATCTGGGCT CTCAGTTGGC GAATATCCGC
GATATCGCGA CCGGTGTGCG TGAGTCGGCC CGGTTCTACG TGGAGCTGCA TAAACTGGGC
GTGAACATCC AGTGTTTCGA CGTCGGCGGT GGTCTGGGCG TGGATTATGA AGGCACGCGC
TCGCAATCCG ACTGCTCCGT CAACTACGGC CTGAATGAAT ACGCCAATAA CGTGATTTGG
GGGATTGGCG AAGCCTGTAA TGAATATGAC CTGCCGCATC CGACGGTGAT TACCGAATCC
GGACGGGCGG TCACTGCTCA TCATACTGTG CTGGTTTCCA ACATCATCGG CGTGGAACGT
AATGAATTCA GCGAACCGGA AGCGCCGTCG GAAGACGCGC CGCGTGCGCT GGAAAGCCTG
TGGGGTACCT GGCAGGAGGT CAACCAGCCC GGCAATCGTC GTTCGCTGCG CGAGTGGCTG
CATGACAGCC AGATGGATTT GTACGATATC CATATGCAAT ATACGCACGG CATGCTGGAT
CTGACCCAGC GCGCGCAAGC CGAGCAGTTG TATCTGAATA TCTGCCAGCG TCTGCAGCAG
CAGTTGGATC CGAGTAATCG CGCGCACCGT CCGATTATCG ATGAACTGCA GGAACGCATG
GCGGACAAAC TGTACGTCAA CTTCTCGCTG TTCCAGTCGA TGCCGGATGC CTGGGGGATA
GACCAACTGT TCCCGGTACT GCCGCTGGAG GGGCTGGATA AGCCGCCGCA GCGTCGTGCC
GTGCTGTTGG ATATTACCTG CGATTCCGAC GGTGCCATTG ATCACTACGT GGATGGCGAT
GGCGTCGCCA CGACCATGCC GATGCCGCCG TATGACCCAG AGAACCCGCC GTTGCTGGGC
TTTTTCATGG TCGGCGCCTA TCAGGAAATT CTTGGCAATA TGCATAACCT GTTCGGCGAT
ACCTCGACCG TGGATGTTTT CGTCTTTCAG GACGGCTCCG TCGAGCTGGA AGAGTCTGAC
GAAGGCAATA CCGTGGCGGA TATGCTGGAA TACGTACAAC TGGATCCCGA AGTGCTCATG
TCTCGTTTCC GCGATCAAGT GAAGGAAACG GATCTGGCGC CGGAGTTGCA GGCCCAGTTC
CTGGAAGAGT TCGAAACCGG CCTGTACGGA TATACTTATC TGGAAGACGA ATAA
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| Protein sequence | MSDDMIHCSS MAGKYDTSRS MQEVAMNDRD ASEMLRTYNI AWWGNNYYDV NELGHISVCP
DPDVPEARVD LAELVKERQQ DNQRLPALFC FPQILQHRLR SINAAFRRAR ESFGYEGGYF
LVYPIKVNQH RRVIEALVNS GEPLGLEAGS KAELMAVLAH AGMTRTVIVC NGYKDREYIR
LALIGEKIGH KVYLVIEKMT EIKLVLEEAE RLNVVPRLGV RARLASQGSG KWQSSGGEKS
KFGLAAAQVL HLVELLRQAN RLDSLQLLHF HLGSQLANIR DIATGVRESA RFYVELHKLG
VNIQCFDVGG GLGVDYEGTR SQSDCSVNYG LNEYANNVIW GIGEACNEYD LPHPTVITES
GRAVTAHHTV LVSNIIGVER NEFSEPEAPS EDAPRALESL WGTWQEVNQP GNRRSLREWL
HDSQMDLYDI HMQYTHGMLD LTQRAQAEQL YLNICQRLQQ QLDPSNRAHR PIIDELQERM
ADKLYVNFSL FQSMPDAWGI DQLFPVLPLE GLDKPPQRRA VLLDITCDSD GAIDHYVDGD
GVATTMPMPP YDPENPPLLG FFMVGAYQEI LGNMHNLFGD TSTVDVFVFQ DGSVELEESD
EGNTVADMLE YVQLDPEVLM SRFRDQVKET DLAPELQAQF LEEFETGLYG YTYLEDE
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