Gene Dd703_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0546 
Symbol 
ID8088872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp609116 
End bp609850 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID644834618 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002986179 
Protein GI242237998 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00942051 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAC CGCGCATTTT TCATCCGGAG CTGCTTGCTC TGCACGGCGG AGAAACCGAC 
CTGAGCGAAG ACGCCGCCAA TCATGTCGGC CGCGTGCTGC GCATGACGGC CGGACAAGCG
TTGCAGCTAT TTGACGGCAG CAATCAGGTA TTTGACGCCG AAATTCTGCA AACGGGGAAA
AAAAGCGTGT GCGTGCGTTA CGCCGCCGGC CGTGTAGAAG ATTGCGAGTC GCCTTTGCAT
CTTCACCTCG GGCAAGTGAT GTCCCGGGGG GAAAAAATGG AATTCACCAT TCAAAAATCC
ATCGAACTGG GTGTCAGCGT CATTACGCCG CTGTTTTCAG AACGCTGCGG CGTCAAACTG
GACGGTGATC GCCTGGACAA AAAAATCGCC CAATGGCAAA ACATCGCCAT TTCCGCTTGC
GAACAGTGCG GCAGAAACCG CATTCCGGAA ATACGCCCCG CCATGACGCT GGAAAGCTGG
TGCGCGGAAT CAGACAATGG GTTAAAACTG AACCTGCATC CGCGGGCGAC GCAAAGCATC
AACACCCTTT CCCTGCCGAT CTCCCGCATT CGCTTGCTGA TCGGCCCGGA AGGCGGACTC
TCTTCGGGTG AAATTGCGAT GACTGCAGCA CAGGGATTTA CCGATATCCT GCTCGGCCCT
CGCGTTTTGC GTACAGAAAC TACCGCGCTC ACCGCAATTA CCGCGCTACA GGTAAGATTC
GGCGACCTGG GGTAA
 
Protein sequence
MRIPRIFHPE LLALHGGETD LSEDAANHVG RVLRMTAGQA LQLFDGSNQV FDAEILQTGK 
KSVCVRYAAG RVEDCESPLH LHLGQVMSRG EKMEFTIQKS IELGVSVITP LFSERCGVKL
DGDRLDKKIA QWQNIAISAC EQCGRNRIPE IRPAMTLESW CAESDNGLKL NLHPRATQSI
NTLSLPISRI RLLIGPEGGL SSGEIAMTAA QGFTDILLGP RVLRTETTAL TAITALQVRF
GDLG