Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0546 |
Symbol | |
ID | 8088872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 609116 |
End bp | 609850 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644834618 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002986179 |
Protein GI | 242237998 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00942051 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATAC CGCGCATTTT TCATCCGGAG CTGCTTGCTC TGCACGGCGG AGAAACCGAC CTGAGCGAAG ACGCCGCCAA TCATGTCGGC CGCGTGCTGC GCATGACGGC CGGACAAGCG TTGCAGCTAT TTGACGGCAG CAATCAGGTA TTTGACGCCG AAATTCTGCA AACGGGGAAA AAAAGCGTGT GCGTGCGTTA CGCCGCCGGC CGTGTAGAAG ATTGCGAGTC GCCTTTGCAT CTTCACCTCG GGCAAGTGAT GTCCCGGGGG GAAAAAATGG AATTCACCAT TCAAAAATCC ATCGAACTGG GTGTCAGCGT CATTACGCCG CTGTTTTCAG AACGCTGCGG CGTCAAACTG GACGGTGATC GCCTGGACAA AAAAATCGCC CAATGGCAAA ACATCGCCAT TTCCGCTTGC GAACAGTGCG GCAGAAACCG CATTCCGGAA ATACGCCCCG CCATGACGCT GGAAAGCTGG TGCGCGGAAT CAGACAATGG GTTAAAACTG AACCTGCATC CGCGGGCGAC GCAAAGCATC AACACCCTTT CCCTGCCGAT CTCCCGCATT CGCTTGCTGA TCGGCCCGGA AGGCGGACTC TCTTCGGGTG AAATTGCGAT GACTGCAGCA CAGGGATTTA CCGATATCCT GCTCGGCCCT CGCGTTTTGC GTACAGAAAC TACCGCGCTC ACCGCAATTA CCGCGCTACA GGTAAGATTC GGCGACCTGG GGTAA
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Protein sequence | MRIPRIFHPE LLALHGGETD LSEDAANHVG RVLRMTAGQA LQLFDGSNQV FDAEILQTGK KSVCVRYAAG RVEDCESPLH LHLGQVMSRG EKMEFTIQKS IELGVSVITP LFSERCGVKL DGDRLDKKIA QWQNIAISAC EQCGRNRIPE IRPAMTLESW CAESDNGLKL NLHPRATQSI NTLSLPISRI RLLIGPEGGL SSGEIAMTAA QGFTDILLGP RVLRTETTAL TAITALQVRF GDLG
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