| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0532 |
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| Symbol | |
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| ID | 8088858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 594036 |
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| End bp | 595727 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644834604 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_002986165 |
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| Protein GI | 242237984 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00749255 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGT TGCTGGGCGG GTTATTACTG CTGGCATGGC CGCTTTGGGC GGCGACTCTC
ACCGATATTC GCGTAAATAA TGCCTCGACG GAAGCTGTGG TGACGTTGAG TTTCAGCGGG
CCGCCGGTGT ATGAATTTTC TTCCCTGAGT AACCCGAACC GGGTGGTGAT CGATATCAGC
CAATCCGGCA TGGTTCAGGG GCTGCCGCTG GAGTTTAACG GCCAGAATAT TATCTCCAGA
ATTCGCTCCA GTAAGGCCAG GGAGCCTGGC AACCTGCGGT TGGTGCTTGA TCTGACGCAG
AAAGCGCAGA CCCGAGCGCA AAAGGAGAAA AGCGGCGGCG GTTATAACGT GGTGCTGAAT
GTGATGGGCG AACGTAAACC GGTAGCCAAA CCACCGGTAT CCACCTCCTC CCGTAGCGCT
GTCACCACCG GGCGCAATCC GCTTACCGGC AAGACGGCAG ATGTTTCTTC GTCGCGTGTT
GCCGTAGAGC CGGTGAAAGC CTCCGCTCGC GGTGGGCGCG GAGAGCGGGT TACTGTGGCG
ATTGATGCGG GTCACGGCGG GCAGGATCCT GGTGCTACCG GGCCCAACGG CCTGTATGAA
AAAACGGTGA CTATTGCGAT TGCCCGCAAA CTCAAGGCGC TGATGAGTAG CGATCCGGAC
TTTAAACCGG TGCTGACCCG CGATGGGGAT TATTTTATCT CGGTGATGGG GCGCTCTGAA
GTTGCCCGCA AGCAAGGGGC CAATCTGCTG GTGTCCATCC ATGCGGATGC GGCTCCCAAC
CGCGGCGCGA CGGGCGCATC GGTGTGGGTA TTGTCCAACC GGCGCGCCAA CAGCGAGATG
GCGAACTGGC TTGAACAACA TGAGAAGCAA TCCGAATTGC TGGGTGGCGC AGGGGATCTG
CTGGCGAACA GCGCTGCCGA TCCCTACCTG AGCCAGGCGG TGCTGGATTT GCAGTTCGGC
CATTCTCAGC GTGTGGGTTA TGACGTAGCG GTGAAAGTGC TGCGTGAGTT GCAGCGCGTC
GGCAGTTTGC ATAAACGGCG GCCGGAACAT GCCAGTCTTG GCGTGCTGCG TTCTCCAGAT
ATTCCTTCAC TGTTGGTGGA AACCGGCTTT ATTTCCAATC CGAGCGAGGA GCGGCTGCTG
GGGAGCAGTG AGTATCAGGA AAAGATTGCC AATGCCATTT ATCAGGGACT GCGCAGTTAT
TTCCAGTCTC ATCCGTTGCA AAATGTCCCA AAGCAGGAAA ACCGGCCGCA AAAGCAGGAA
AACCGGCCGC AAGCGTCGTC GGTGGTTAAC GCCCCCGCGT CTGCGCCGGT AAAGTCGGCA
ACGCCTGCCG TGAGGAATGA CGCGGTGACT CAGCGTCATA CGGTGGCGCG CGGCGAAACC
TTGTCCGGCA TCGCTGCGCA GTATGGCGTC AGCATGTCCA CCCTTCGTGA CCTCAACAGC
CTGAAAAACG ATGTGGTGTG GGTTGGACAA CGGCTGAAAA TTCCTGGTAA GGCCTCGACG
CCAGGCGTCA CGAAAACGCC TCCCGCACCC AAAAAAAGCA CCGTGGTGAT TAAACATAAA
GTGATGCGCG GCGATACGCT CAGCGCCATT GCGGTTCGTT ATGGCGTGAG CATGAAAGAG
ATCCAACAGG TGAATAATAT GACTTCCGGC ACTGTACAAC TCGGGCAGAC GTTGGTCATA
CCCTCCACGT GA
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| Protein sequence | MKALLGGLLL LAWPLWAATL TDIRVNNAST EAVVTLSFSG PPVYEFSSLS NPNRVVIDIS
QSGMVQGLPL EFNGQNIISR IRSSKAREPG NLRLVLDLTQ KAQTRAQKEK SGGGYNVVLN
VMGERKPVAK PPVSTSSRSA VTTGRNPLTG KTADVSSSRV AVEPVKASAR GGRGERVTVA
IDAGHGGQDP GATGPNGLYE KTVTIAIARK LKALMSSDPD FKPVLTRDGD YFISVMGRSE
VARKQGANLL VSIHADAAPN RGATGASVWV LSNRRANSEM ANWLEQHEKQ SELLGGAGDL
LANSAADPYL SQAVLDLQFG HSQRVGYDVA VKVLRELQRV GSLHKRRPEH ASLGVLRSPD
IPSLLVETGF ISNPSEERLL GSSEYQEKIA NAIYQGLRSY FQSHPLQNVP KQENRPQKQE
NRPQASSVVN APASAPVKSA TPAVRNDAVT QRHTVARGET LSGIAAQYGV SMSTLRDLNS
LKNDVVWVGQ RLKIPGKAST PGVTKTPPAP KKSTVVIKHK VMRGDTLSAI AVRYGVSMKE
IQQVNNMTSG TVQLGQTLVI PST
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