Gene Dd703_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0524 
Symbol 
ID8088848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp584104 
End bp585051 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content64% 
IMG OID644834594 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002986157 
Protein GI242237976 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA AAACACCTCG CCCTCTCTAT CGCCTGGGCG CCATCCTGCT GGGCAGTTGG 
CTGCTGTTGG GCAACGCACT GGCGTCCGGC ATCGACCTGA AAGCCAATCA ACAGCCCATC
CATGCACCGA CAAACCCGCA AGCTACCGCG CTGATCCCAC CGGGGTTCGC ATTCGCCGTG
CCGGGCAAAC TCACCGTCGC CGTGGCGTCG CTACGCGCTT CGCCGCCGCT GGTGCTGTTG
GGCGATGACA ACAAAACCCT TTACGGCAGC GAGCCGGACA TCGCCCGCCT GGTGGCGGAC
AGTCTGGGGC TGGAGCTGAA CATCGTGCCG ACCTCCTGGG AAGACTGGCC GCTCGGCGTC
GCCTCCGGGA AATATGACAT CGCCGTCACC AACATCACCG TCACCAAAGC GCGCAAGGAA
CGGTTCGATT TCGCCACCTA TCGCGCCGAT ACGCTCGGTT TCTATGTCAA ATCCGCCAGC
CCGATCAAAA CCATCGACAG CGCCAAAGAC ATCGCCGGCC TGAAGGTGAT CGTCGGCTCC
GGCACCAATC AGGAAGCCAT CCTGCTGGAG TGGGACAAAC AGAACCGCGC TCAGGGGCTG
CCGCCGGTCG CGCCTATCTA CAGCACCGAT GACGCCGCCG CGACGCTCAG CATCCAGTCC
GGTCGGGCCG ATGCCACCTT CGGGCCCAAC GTCACCGGGG CCTACAAAGC CTCGCTGGCC
GGCAACACCC GGCTGGTGGG CATCGTCAAC GGCGGCTGGC CGCAAGCGGC GCACATCGCC
GTCACCACCC GCAAGGGCAA CGGGCTGGTC AACGCCGTCA ACGCCGCGCT GAACGGCGTG
ATAGAGGGCG GCCAATACGA CCAGGTACTG AACCGCTGGG GAGAGAGCGT GGAGCGTATA
GCACGTTCGG AAATCAATCC GCCCGGGCTT GGCGATGATC AACCGTAA
 
Protein sequence
MQNKTPRPLY RLGAILLGSW LLLGNALASG IDLKANQQPI HAPTNPQATA LIPPGFAFAV 
PGKLTVAVAS LRASPPLVLL GDDNKTLYGS EPDIARLVAD SLGLELNIVP TSWEDWPLGV
ASGKYDIAVT NITVTKARKE RFDFATYRAD TLGFYVKSAS PIKTIDSAKD IAGLKVIVGS
GTNQEAILLE WDKQNRAQGL PPVAPIYSTD DAAATLSIQS GRADATFGPN VTGAYKASLA
GNTRLVGIVN GGWPQAAHIA VTTRKGNGLV NAVNAALNGV IEGGQYDQVL NRWGESVERI
ARSEINPPGL GDDQP