| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0454 |
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| Symbol | metH |
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| ID | 8088696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 489872 |
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| End bp | 493558 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644834523 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002986087 |
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| Protein GI | 242237906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0341811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA ATCGACAGCA GGAATTACAG CAGCAACTGG ATCAGCGCAT CATGATTTTG
GACGGCGGCA TGGGCACCAT GATCCAGGGG TATCGGCTAC AGGAAGCGGA CTACCGCGGC
GCGCGTTTTG CCGACTGGCA TAGCGACCTG AAAGGCAACA ACGACCTGCT GGTGCTGACG
AAACCGGACG TGATCGCCGC CATCCACCAT GATTATCTGG CCGCCGGCGC TGATATTCTG
GAAACCAATA CCTTCAATGC GACCCGCATC GCTATGGCCG ACTACGACAT GGAAGCTCTG
TCGGCGGAAA TCAATACCGT CGCCGCACGT CTGGCGCGCA CCTGCGCCGA CGAATGGACG
GCACGCACGC CGGAGCGCCC GCGTTATGTC GCTGGGGTCT TGGGGCCGAC CAATCGCACC
GCCTCCATTT CGCCGGACGT GAACGACCCG GCGTACCGCA ACGTCAGTTT TGACCAACTG
GTGGACGCTT ATCGGGAGTC GACCCGGGCG CTGATTGAAG GCGGCGTCGA TCTGATTCTG
ATTGAGACCA TTTTCGATAC GTTGAACGCT AAAGCCGCGG TTTATGCGGT GGAGTGCGAG
TTTGAAGCGT TGGGCATCAC CTTGCCGGTG ATGATTTCCG GCACCATTAC CGATGCGTCC
GGTCGTACAT TATCCGGGCA GACCACGGAA GCGTTCTACA ATTCCCTGCG CCATGCCCGC
CCACTCTCGT TTGGTCTTAA CTGTGCCTTG GGGCCGGACG AACTGCGTCA GTACGTGGCT
GAACTGGCAC GCATTTCCGA ATGCTATGTC TCGGCGCATC CCAACGCCGG GTTGCCGAAC
GCCTTCGGCG AATATGATCT GGACGCACGG GAGATGGCGC AGCAGGTCGG CGAGTGGGCG
CAATCAGGAT TCCTGAACAT TATCGGCGGT TGTTGCGGTA CGACGCCCGC GCACATCGCC
GCCATGGCGC AAGCGGTGGA CGGCGTGCCG CCGCGCAAGC TGCCGCAGAC ACCGGTCGCC
TGTCGGCTGT CCGGTCTGGA GCCGCTCAAC ATCGGTGCCG ACACCCTGTT CGTGAATGTC
GGCGAGCGTA CCAACGTGAC CGGTTCGGCT AAATTCAAAC GCCTGATTAA AGAAGAAAAA
TACAATGAAG CGCTGGATGT GGCGCGTCAG CAGGTGGAGA ACGGCGCACA GATTATCGAT
ATCAACATGG ACGAGGGCAT GCTCGACGCC GAAGCGGCGA TGGTGCGTTT CCTCAATCTG
ATCGCCGGTG AGCCGGATAT CGCCCGCGTG CCGATCATGA TCGACTCCTC CAAATGGGAC
GTGGTGGAAG CGGGCCTGAA GTGCATTCAA GGCAAAGGTA TCGTCAACTC CATCTCGATG
AAGGAAGGGG TGGATATCTT TATCGAACAT GCCAAAAAGG TGCGCCGTTA CGGCGCGGCC
GTGGTGGTGA TGGCGTTCGA TGAAGTCGGC CAGGCGGATA CCCGCGAGCG CAAGATCGAC
ATCTGTCGTC GTGCCTACCG GATTCTCACC GAAGAAGTCG GCTTTCCGCC GGAAGACATC
ATTTTCGACC CCAATATTTT TGCCGTCGCC ACCGGCATTG AAGAACACAA CAACTATGCG
GTGGATTTCA TCGGCGCCTG TGACGATATC AAGACCCAAT TGCCGCACGC GCTGATTTCC
GGCGGGGTGT CCAACGTGTC GTTCTCGTTC CGCGGCAATG AGCCGGTGCG CGAGGCTATC
CACGCCGTCT TCCTCTATTA CGCCATCCGC AACGGTATGG ACATGGGCAT CGTCAATGCC
GGCCAACTGG CGATTTACGA CGACCTGCCC GCCGAGCTGC GCGATGCGGT GGAGGACGTT
GTCCTCAATC GCCGTACTGA TGGGACGGAA CGCCTGCTGG CGATCGCCGA GAAGTATCGC
GGCAGCAAAT CCGACGACGA CAGCAACAAG GGCGAGGCCG AATGGCGCGG CTGGCCGGTC
AAAAAACGGC TGGAGTACGC GCTGGTTAAA GGGATTACCG AGTTCATCGA GGCGGATACC
GAAGAGGCGC GGGCGCAGGC GGCGCGGCCG ATCGAAGTGA TCGAAGGGCC GTTGATGGAC
GGTATGAATG TGGTGGGCGA TCTGTTCGGC GCGGGCAAGA TGTTTCTGCC GCAGGTGGTG
AAATCGGCGC GCGTGATGAA GCAGGCGGTA GCCTATCTGG AGCCGTTCAT TCAGGCCAGC
AAGGAGGCGG GCAGCAGCGC CGGTAAAATC CTGCTGGCGA CGGTGAAGGG CGATGTGCAC
GACATCGGCA AAAACATCGT CGGCGTGGTA CTGCAATGCA ACAACTACGA GATCATCGAT
CTGGGCGTCA TGGTGCCGTC GGACAAAATT CTTAAAACAG CACGGGAAGA GAAGGTGGAT
ATCATCGGCC TGTCCGGGCT GATTACCCCG TCGCTGGATG AAATGGTCAA CGTGGCGAAG
GAGATGGAAC GCCAGGGGTT CACGCTCCCG TTGCTGATTG GCGGAGCGAC CACCTCCAAA
GCGCATACCG CGGTGAAGAT CGAACAGAAT TACAGCGGGC CGACGGTGTA CGTGCAGAAC
GCTTCCCGTT CGGTGAGCGT GGTGTCGTCG CTGCTATCGG CGACGCAGCA CGACGAGTTC
GTGGCGCGTA TTCGCCGCGA GTACGAAACG GTGCGCATCC AGCATGCCCG CAAGAAACCG
CGTACACCAC CGGTGTCGCT GGACGCGGCG CGGGAGAACG CACAGTCCTT CGACTGGGAA
AGCTACACAC CGCCAGCGGC GCACCGTCTT GGCGTGCATC CGGTATCCGC CGGCATCGAC
ACGCTGCGTC ATTACATCGA CTGGACGCCG TTCTTCATGA CCTGGTCGCT GGCGGGCAAA
TACCCCAATA TTCTGGAAGA CGAGGTGGTC GGCGAGGAAG CCAAGCGGCT GTTTGCCGAC
GCCAACGCCA TGCTGGATCA ACTCTCTGCC GATGGCACGC TCAATCCGCG CGGCGTGGTG
GGCCTGTTCC CGGCCAACCG GGTCGGCGAC GATATCGAGA TTTATACCGA TGAGCGCCGC
GACACGGTGT CCGCACTGAG CTGCCACCTG CGTCAGCAGA CGGAAAAGAC CGACTTCCCC
AATTACTGTC TGGCGGATTT CGTGGCGCCG AAATCCAGCG GCAAGCCGGA TTATATCGGC
GCGTTCGCCG TGACCGGCGG GCTGGAGGAG GATGAACTGG CGGCGCAGTG GGAAGCACAG
CATGACGATT ACAACAAAAT CATGCTCAAG GCGCTGGCGG ATCGGTTGGC GGAGGCCTTC
GCCGAATATC TGCACGAGCG GGTGCGCAAG GTGTACTGGG GCTATGCGCC GAACGAGAAC
CTGGGCAACG ACGAACTGAT CCGCGAAAAC TATCAGGGTA TTCGCCCGGC GCCGGGCTAC
CCGGCCTGCC CGGATCACAC CGAGAAGGCT ATCCTCTGGC AACTGCTGGA TGTGGATAAC
ACCGTCGGCA TGAAACTCAC CGAGTCTTAC GCCATGTGGC CGGGCGCGTC GGTCTCCGGT
TGGTACTTCA GCCATCCGGA CAGCAAATAT TTCGCCGTGG CGCAAATTCA GCGCGACCAG
GTGGACGACT ATGCCGCCCG CAAGCACATG CCGGTGGCCG ACGTCGAACG CTGGCTGGCG
CCGAATTTGG GGTATGATGC GGATTGA
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| Protein sequence | MAKNRQQELQ QQLDQRIMIL DGGMGTMIQG YRLQEADYRG ARFADWHSDL KGNNDLLVLT
KPDVIAAIHH DYLAAGADIL ETNTFNATRI AMADYDMEAL SAEINTVAAR LARTCADEWT
ARTPERPRYV AGVLGPTNRT ASISPDVNDP AYRNVSFDQL VDAYRESTRA LIEGGVDLIL
IETIFDTLNA KAAVYAVECE FEALGITLPV MISGTITDAS GRTLSGQTTE AFYNSLRHAR
PLSFGLNCAL GPDELRQYVA ELARISECYV SAHPNAGLPN AFGEYDLDAR EMAQQVGEWA
QSGFLNIIGG CCGTTPAHIA AMAQAVDGVP PRKLPQTPVA CRLSGLEPLN IGADTLFVNV
GERTNVTGSA KFKRLIKEEK YNEALDVARQ QVENGAQIID INMDEGMLDA EAAMVRFLNL
IAGEPDIARV PIMIDSSKWD VVEAGLKCIQ GKGIVNSISM KEGVDIFIEH AKKVRRYGAA
VVVMAFDEVG QADTRERKID ICRRAYRILT EEVGFPPEDI IFDPNIFAVA TGIEEHNNYA
VDFIGACDDI KTQLPHALIS GGVSNVSFSF RGNEPVREAI HAVFLYYAIR NGMDMGIVNA
GQLAIYDDLP AELRDAVEDV VLNRRTDGTE RLLAIAEKYR GSKSDDDSNK GEAEWRGWPV
KKRLEYALVK GITEFIEADT EEARAQAARP IEVIEGPLMD GMNVVGDLFG AGKMFLPQVV
KSARVMKQAV AYLEPFIQAS KEAGSSAGKI LLATVKGDVH DIGKNIVGVV LQCNNYEIID
LGVMVPSDKI LKTAREEKVD IIGLSGLITP SLDEMVNVAK EMERQGFTLP LLIGGATTSK
AHTAVKIEQN YSGPTVYVQN ASRSVSVVSS LLSATQHDEF VARIRREYET VRIQHARKKP
RTPPVSLDAA RENAQSFDWE SYTPPAAHRL GVHPVSAGID TLRHYIDWTP FFMTWSLAGK
YPNILEDEVV GEEAKRLFAD ANAMLDQLSA DGTLNPRGVV GLFPANRVGD DIEIYTDERR
DTVSALSCHL RQQTEKTDFP NYCLADFVAP KSSGKPDYIG AFAVTGGLEE DELAAQWEAQ
HDDYNKIMLK ALADRLAEAF AEYLHERVRK VYWGYAPNEN LGNDELIREN YQGIRPAPGY
PACPDHTEKA ILWQLLDVDN TVGMKLTESY AMWPGASVSG WYFSHPDSKY FAVAQIQRDQ
VDDYAARKHM PVADVERWLA PNLGYDAD
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