Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0451 |
Symbol | |
ID | 8088693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 485667 |
End bp | 486977 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644834520 |
Product | isocitrate lyase |
Protein accession | YP_002986084 |
Protein GI | 242237903 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATTA CCTCTCGTAC CCAACAAATC CGGCAACTCG AACAGGAATG GAAAACCCCG CGCTGGGAAG GCATTGTCCG CCCTTATCGG ACAGAGGATG TGATTAACCT GCGCGGCTCG GTGAATCCAG CTTGTACGCT GGCGCAGCGA GGCGCGGAGA AACTGTGGGC CTTGCTGCAC GGAGAATCGC GTAAGGGATA CATCAATTGT TTGGGCGCGC TGACCGGCGG CCAGGCGTTG CAGCAGGCGA AAGCCGGTCT GGAAGCGGTG TACCTGTCGG GTTGGCAGGT CGCGGCGGAC GCTAACCTGG CCGCCAATAT GTACCCCGAC CAGTCGCTTT ATCCGGCGAA CTCGGTACCG GCCGTGGTGC AGCGCATCAA CGGCACCTTT CGTCGTGCGG ATCAGATCCA GTGGGCGAAC GGCATTGAAC CGGGCGATCC GCGTTTTATC GACTATTTCC TGCCGATCGT GGCGGATGCG GAAGCCGGAT TCGGCGGCGT ACTGAACGCA TTTGAGCTGA TGAAATCGAT GATTGAGGCG GGCGCGGCGG CGGTTCATTT CGAAGATCAA CTGGCCTCGG TGAAGAAGTG CGGCCACATG GGTGGCAAGG TGCTGGTGCC GACGCAGGAA GCGGTGCAGA AACTGGTCGC TGCACGTCTG GCGGCGGATG TGCTGGGCGT GCCGACGTTG CTGGTCGCCC GTACCGATGC GGATGCGGCA GATCTGCTGA CCTCCGACTG CGACAGCTAC GATCAGGATT TCGTCACTGG CGAACGGACC GTTGAGGGGT TCTTCCGTAC TCGCGCCGGC GTGGAACAGG CTATCAGCCG CGGGTTAGCC TACGCGCCGT ATGCCGATCT GGTGTGGTGC GAAACCTCGA CACCGGATTT GGCTCTGGCT CGGCGCTTCG CCGAAGCCAT TCACGCCCGC TTCCCCGGCA AACTGCTGGC CTACAACTGT TCTCCGTCGT TCAACTGGAA AAAGAACCTG GATGACCGTG CTATCGCCCG TTTTCAGGAT GAACTGTCCG AGATGGGCTA CAAGTACCAG TTCATCACGC TGGCCGGGAT CCACAGCATG TGGTTCAACA TGTTTGATCT GGCCCATGCC TATGCACAGG GCGAAGGGAT GAAGCATTAC GTCGAGAAGG TACAGCAGAG AGAATTCGCT GCAATTTCAG AAGGGTACAC TTTCTCCTCC CATCAGCAGG AGGTGGGAAC CGGCTACTTC GACAAAGTCA CGACCATTAT TCAGGGCGGA TCCTCTTCCG TCACGGCGTT GACCGGTTCG ACGGAAGAAC AGCAGTTCTG A
|
Protein sequence | MSITSRTQQI RQLEQEWKTP RWEGIVRPYR TEDVINLRGS VNPACTLAQR GAEKLWALLH GESRKGYINC LGALTGGQAL QQAKAGLEAV YLSGWQVAAD ANLAANMYPD QSLYPANSVP AVVQRINGTF RRADQIQWAN GIEPGDPRFI DYFLPIVADA EAGFGGVLNA FELMKSMIEA GAAAVHFEDQ LASVKKCGHM GGKVLVPTQE AVQKLVAARL AADVLGVPTL LVARTDADAA DLLTSDCDSY DQDFVTGERT VEGFFRTRAG VEQAISRGLA YAPYADLVWC ETSTPDLALA RRFAEAIHAR FPGKLLAYNC SPSFNWKKNL DDRAIARFQD ELSEMGYKYQ FITLAGIHSM WFNMFDLAHA YAQGEGMKHY VEKVQQREFA AISEGYTFSS HQQEVGTGYF DKVTTIIQGG SSSVTALTGS TEEQQF
|
| |