Gene Dd703_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0450 
Symbol 
ID8088692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp484045 
End bp485643 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content53% 
IMG OID644834519 
Productmalate synthase A 
Protein accessionYP_002986083 
Protein GI242237902 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01344] malate synthase A 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC AGACGATGAA CAGGGGGCTG GCGTTTAGTC AGCGTTTTGG CGAGGCTGAG 
CGACAAATTC TTACGGATGA AGCCATCGAT TTCCTCACCG ATTTGGTCGA GAGGTTTACG
CTTTCGCGCA ATCGCCTATT GGCGGAGCGT CGAGAAGTAC AACGCCGGAT TGATGAAGGT
GTACTTCCTG ATTTTATTTC GGAAACTATT TCCATAAGAA ATTCAGAGTG GAAAATCCGA
GGCATTCCAG ATGACTTGCT CGACCGACGA GTAGAAATCA CGGGCCCAGT CGAGCGCAAA
ATGGTGATTA ATGCATTGAA TGCCAATGTA AAGGTCTTCA TGGCGGATTT TGAGGATTCG
CTGGCGCCGA GTTGGCAGAA GATCATTGAA GGGCACATTA ATTTGCGGGA TGCGGTTCGT
GGCGCCATCA CTTACACCAA CGAAGACGGT AAAATTTATC AACTCAAACC GCACCCTGCG
GTATTGATTT GCCGGGTTCG CGGCTTGCAT CTGCCGGAAA AACATGTGGT GTGGCAGCAG
GAGCCCATTC CAGGCAGCCT GTTTGATTTT GCGCTCTATT TCTTCCACAA CTACCGGCAA
TTGCTCAGCA AAGGGAGCGG CCCCTATTTT TATCTGCCTA AATTACAGTC TTATCAGGAA
GCCGCCTGGT GGGCTGAGGT ATTCAGCCAT ACGGAGGATC GCTTCGGTCT GCCGCGCGGC
ACGATCAAGG CGACGGTGCT GATTGAAACA CTGCCCGCTG TCTTCCAGAT GGATGAGATT
CTCTATTATC TGAGCGATCA CATCGTCGGT CTGAACTGTG GTCGCTGGGA TTATATTTTC
AGCTATATCA AAACCTTGAA GCATCATTCC GATCGCGTAC TGCCGGATCG GCAATCCGTC
ACGATGGACA AACCGTTCCT CAGTGCCTAC TCACGGCTGT TGATTAAAAC CTGTCATCGT
CGCGGTGCTT TTGCTATGGG CGGCATGTCG GCGTTTATCC CCAGCAAGGA TAAGGAACGC
AACGACTGGG TACAGGAAAA AGTTCGACAG GACAAAGAGT TGGAAGCTCG CAATGGTCAT
GACGGCACCT GGGTCGCGCA TCCGGGCCTG GCGGACACTG TTATGCCGGT CTTCGATCGT
GTACTGGCGG GGCGACAAAA CCAGCTGGAT GTCCTGCGAG AAGAGGATGC GCCGGTCACT
GCCGACGATC TGCTGGCGCC TTGCCCGGGT GAGCGTACTG AAGCCGGTAT GCGCGCCAAC
ATCCGCGTCG CGGTGCAGTA CATCGAAGCC TGGATTTCCG GCAACGGATG CGTACCGATC
TACGGCCTGA TGGAAGATGC CGCGACGGCT GAAATCTCAC GGACTTCCAT CTGGCAATGG
ATTCACCACG GTAAAGCCCT CAGTGATGGC CGCGTGGTCA CTAAAGCACT GTTCCAGCAA
ATGCTGGAGG AAGAAATGCA GGTCGTCCGG CAGGAGATCG GCGATATACG TTTTCAGGCT
GGACGTTTTA GTGAAGCCGC TCGCCTGATG GAGCGCATCA CCACGCAGGG CGAGCTGATC
GATTTTCTCA CCTTACCCGG TTACGACTTA CTTGATTAA
 
Protein sequence
MTQQTMNRGL AFSQRFGEAE RQILTDEAID FLTDLVERFT LSRNRLLAER REVQRRIDEG 
VLPDFISETI SIRNSEWKIR GIPDDLLDRR VEITGPVERK MVINALNANV KVFMADFEDS
LAPSWQKIIE GHINLRDAVR GAITYTNEDG KIYQLKPHPA VLICRVRGLH LPEKHVVWQQ
EPIPGSLFDF ALYFFHNYRQ LLSKGSGPYF YLPKLQSYQE AAWWAEVFSH TEDRFGLPRG
TIKATVLIET LPAVFQMDEI LYYLSDHIVG LNCGRWDYIF SYIKTLKHHS DRVLPDRQSV
TMDKPFLSAY SRLLIKTCHR RGAFAMGGMS AFIPSKDKER NDWVQEKVRQ DKELEARNGH
DGTWVAHPGL ADTVMPVFDR VLAGRQNQLD VLREEDAPVT ADDLLAPCPG ERTEAGMRAN
IRVAVQYIEA WISGNGCVPI YGLMEDAATA EISRTSIWQW IHHGKALSDG RVVTKALFQQ
MLEEEMQVVR QEIGDIRFQA GRFSEAARLM ERITTQGELI DFLTLPGYDL LD