Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0437 |
Symbol | |
ID | 8088672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 468110 |
End bp | 469405 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644834500 |
Product | 16S rRNA methyltransferase B |
Protein accession | YP_002986071 |
Protein GI | 242237890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCA AATATAATCT TCGCAGTATC GCTGCAGCAG TCATCGCTCA GGTGCTGGAT CACGGGCAAT CGCTCAGTCA GTCACTTCCG GCCGTTCAAC GAGACATTGC GGAAAAGGAT CGCGCTTTAC TGCAGGAGCT TTGCTTTGGG GTATTGCGCG TATTGCCTCA GCTTGATTGG TGCATCGGTC AGTTGATGGC GAAACCGCTG ACAGGCAAAC AGAGAGTGCT GCATTACTTG TTGATGGTCG GGCTTTATCA ACTCTTATAT ACCCGTATTC CCCCACACGC GACATTGGCT GAAACCGTAG AAGGCGCAAC AGCACTGAAA CGCCCACAGC TCAAAGGATT GATCAACGGT GTCCTGCGCC AGTTTCAACG TCAACAGGAA GAACTGGTAC AGAAGATGCA GAAGACTTCC GCCCTCCATG CTCATCCCGA ATGGTTGCTG ACCAGATTAA AAAAAGCCTA TCCGGAGACA TGGCAGGATA TTATCGACGC AAATAACCAA CATCCTCCGA TGTGGTTACG GGTCAATCGC CAGCACAACG AACGGGATGG CTATATTGCT CTATTGCAGG AACAGGGGAT CCCGGCATCG AAGCATCCCG ATTATCAAGA TGCCATCAAG CTGGACACGC CCTCCCCAGT CACTTCTCTG CCGGGTTTCG AGCAAGGATG GATCACGGTT CAGGATGCAT CAGCCCAAGG CTGCGCTTAT TGGCTTGATC CACAAAACAA TGAAGATATT CTCGATCTCT GCGCCGCTCC TGGGGGGAAA ACCACCCACA TCCTGGAAAT TGCGCCCAAA GCGCGAGTCC TCGCCGTTGA CGTAGACGAG CATCGGCTTG CCAGAGTGAA GGAAAATCTT CAGCGTCTAC GCCAGCATGC GGACGTGCGG CAGGGAGATG GACGAGTACC GGAAGAATGG TGCGGCGACA GCCAGTTCGA TCGCATCCTA CTTGATGCGC CATGCTCTGC GACCGGAGTG ATTCGACGCC ATCCCGATAT CAAATGGTTA CGTCGAGACA GTGATATCGT CGAACTGGCA AATCTTCAGC GAGAAATTCT TGACGCTATC TGGCCTCGCC TGAAAATCGG TGGAACCTTG GTCTATGCAA CCTGTTCCAT ATTACCGGAA GAAAACCAAC AACAAATTAT TTCATTCCTG CAACGCCACG CTGATGCTGT ACTAAGAGAA ACCGGTTCAC CAGAAAAACC AGGCGTTCAG AAGTTGCCTT CACCGCAGGA TGGTGATGGT TTCTTCTACG CAAAACTGAT AAAAATCGAA CATTAA
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Protein sequence | MKSKYNLRSI AAAVIAQVLD HGQSLSQSLP AVQRDIAEKD RALLQELCFG VLRVLPQLDW CIGQLMAKPL TGKQRVLHYL LMVGLYQLLY TRIPPHATLA ETVEGATALK RPQLKGLING VLRQFQRQQE ELVQKMQKTS ALHAHPEWLL TRLKKAYPET WQDIIDANNQ HPPMWLRVNR QHNERDGYIA LLQEQGIPAS KHPDYQDAIK LDTPSPVTSL PGFEQGWITV QDASAQGCAY WLDPQNNEDI LDLCAAPGGK TTHILEIAPK ARVLAVDVDE HRLARVKENL QRLRQHADVR QGDGRVPEEW CGDSQFDRIL LDAPCSATGV IRRHPDIKWL RRDSDIVELA NLQREILDAI WPRLKIGGTL VYATCSILPE ENQQQIISFL QRHADAVLRE TGSPEKPGVQ KLPSPQDGDG FFYAKLIKIE H
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