Gene Dd703_0429 details

Gene Information

• Locus tag: Dd703_0429
• Symbol: rpsD
• ID: 8088664
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 462109
• End bp: 462729
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644834493
• Product: 30S ribosomal protein S4
• Protein accession: YP_002986064
• Protein GI: 242237883
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAT ATTTGGGTCC TAAGCTCAAG CTGAGCCGTC GTGAGGGCAC CGACCTGTTC 
CTAAAGTCTG GTGTTCGTGC GATCGATTCC AAGTGTAAAA TTGAACAAGC TCCTGGTCAG 
CATGGTGCGC GTAAGCCGCG TCTATCTGAC TATGGTGTAC AGTTGCGTGA GAAGCAGAAA 
GTTCGCCGTA TCTACGGTGT TCTGGAGCGT CAGTTCCGTA ACTATTATAA AGAAGCTGCT 
CGTCTGAAAG GCAACACAGG TGCGAACCTG TTGCAGTTGC TGGAAGGTCG TCTGGACAAC 
GTAGTTTATC GTATGGGGTT CGGTGCTACT CGTGCTGAAG CACGTCAGCT AGTGGGCCAC 
AAGGCAGTCA TGGTAAACGG TCGCGTTGTT AATATCGCTT CTTATCAGGT CTCTCCGAAT 
GATGTCGTCA GCATCCGCGA GAAGGCGAAA AAGCAGTCAC GTGTTAAAGC TGCTTTGGAG 
CTGGCTGAAC AGCGCGAAAA GCCGACTTGG CTGGAAGTTG ATGCTGCCAA GATGGAAGGT 
GTGTTCAAAC GTATTCCTGA ACGTACCGAT CTGTCTGCGG ACATTAATGA ACACCTGATC 
GTCGAGCTTT ACTCCAAGTA A 

 

Protein sequence

MARYLGPKLK LSRREGTDLF LKSGVRAIDS KCKIEQAPGQ HGARKPRLSD YGVQLREKQK 
VRRIYGVLER QFRNYYKEAA RLKGNTGANL LQLLEGRLDN VVYRMGFGAT RAEARQLVGH 
KAVMVNGRVV NIASYQVSPN DVVSIREKAK KQSRVKAALE LAEQREKPTW LEVDAAKMEG 
VFKRIPERTD LSADINEHLI VELYSK