Gene Dd703_0405 details

Gene Information

• Locus tag: Dd703_0405
• ID: 8088640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 450854
• End bp: 451483
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644834469
• Product: ribosomal protein L3
• Protein accession: YP_002986040
• Protein GI: 242237859
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00399178
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTT TAGTCGGTAA AAAAGTGGGC ATGACCCGCA TCTTCACTGA AGATGGCGTT 
TCTATCCCCG TAACCGTAAT CGAAATTGAA GCAAACCGTG TGACTCAGGT TAAAACCCTG 
GAGAACGACG GATACCGTGC TGTCCAGGTA ACTACCGGTG CTAAAAAAGC TAACCGCGTA 
AACAAGCCGG AAGCAGGTCA TTTTGCCAAG GCTGGCGTTG AGGCTGGTCG TACTCTGCGT 
GAATTCCGTC TGGCTGAAGG CGAAGATTTC GCTGTAGGTC AGAACATCAG CGTTGAAATT 
TTCGCTGACG TCAAGAAGGT TGACGTTACC GGGACTTCAA AAGGTAAAGG TTTTGCCGGT 
ACCGTTAAGC GTTGGAACTT CCGTACTCAG GACGCTACTC ACGGTAACTC CTTGTCTCAC 
CGTGTTCCGG GTTCTATCGG TCAGAACCAG ACTCCGGGCA AAGTGTTCAA AGGTAAGAAG 
ATGGCAGGCC AGCTGGGTAA TGAGCGCGTA ACCGTTCAGA GCCTGGACGT AGTACGTGTT 
GACGCTGAGC GCAACCTGCT GCTGGTTAAA GGTGCGGTTC CGGGTGCAAC CGGTAGCGAC 
CTGATCGTTA AACCGGCTGT GAAGGCGTGA 

 

Protein sequence

MIGLVGKKVG MTRIFTEDGV SIPVTVIEIE ANRVTQVKTL ENDGYRAVQV TTGAKKANRV 
NKPEAGHFAK AGVEAGRTLR EFRLAEGEDF AVGQNISVEI FADVKKVDVT GTSKGKGFAG 
TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGQLGNERV TVQSLDVVRV 
DAERNLLLVK GAVPGATGSD LIVKPAVKA