| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0399 |
|---|
| Symbol | |
|---|
| ID | 8088634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 445406 |
|---|
| End bp | 445876 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644834463 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_002986034 |
|---|
| Protein GI | 242237853 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000050235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTC GTCGCGTCAT TGGTCAGCGT AAAATTCTGC CGGATCCGAA GTTCGGATCA
GAACTGCTGG CTAAATTTGT CAATATCCTG ATGGTAGATG GTAAAAAATC TACTGCAGAA
ACAATCGTCT ATACCGCGCT GGAGACCCTG GCTCAGCGTT CTGGTAAAGA CCACCTGGAA
GCCTTTGAAG CAGCGCTGGA CAACGTGCGC CCGACTGTCG AAGTGAAGTC GCGCCGTGTT
GGTGGTTCTA CTTATCAGGT TCCAGTTGAA GTTCGTCCGG TTCGTCGCAA TGCACTGGCT
ATGCGTTGGA TCGTTGAAGC TGCTCGTAAA CGCGGTGATA AATCCATGGC TTTGCGCCTG
GCGAACGAAC TTTCTGATGC AGCAGACAAT AAAGGTACTG CTGTGAAGAA ACGTGAAGAC
GTTCACCGTA TGGCTGAAGC CAACAAGGCG TTCGCTCACT ACCGCTGGTA A
|
|---|
| Protein sequence | MPRRRVIGQR KILPDPKFGS ELLAKFVNIL MVDGKKSTAE TIVYTALETL AQRSGKDHLE
AFEAALDNVR PTVEVKSRRV GGSTYQVPVE VRPVRRNALA MRWIVEAARK RGDKSMALRL
ANELSDAADN KGTAVKKRED VHRMAEANKA FAHYRW
|
|---|
| |