Gene Dd703_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0338 
Symbol 
ID8088573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp387943 
End bp388512 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID644834404 
ProductShikimate kinase 
Protein accessionYP_002985975 
Protein GI242237794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGC GGGTTATCAT TAACGAATTT CTTAGTAATA CCAAAAAAAT GGCAGAGAAA 
CGCAATATCT TTCTTGTTGG GCCCATGGGT GCCGGCAAAA GCACTATTGG CCGTCAGTTA 
GCTCAGCAGC TCAACATGGA ATTCTTCGAC TCCGATCAAG AAATTGAGCG ACGTACCGGG 
GCTGATGTTG GCTGGGTATT CGATTTAGAA GGCGAAGAAG GTTTCCGCGA GCGCGAAGAG 
AAAATTATTA ATGAGCTGAC GGAAAAACAA GGAATTGTTT TGGCTACAGG CGGTGGCTCG 
GTGAAATCAC GCGAGACCCG CAATCGTCTT TCCGCGCGGG GCGTGGTGGT CTATCTGGAG 
ACCACAATCG AAAAGCAACT GGCTCGCACG CAACGGGATA AAAAACGCCC GTTACTTCAG 
GTAGAAAACC CTCCACGCGA AGTCCTTGAA GCATTGGCAA GAGAGCGTAA TCCATTATAC 
GAAGAGATTG CCGATGTCAC TATTCGCACC GATGAACAAA GCGCCAAGGT AGTTGCCAAC 
CAGATCATCA GCATGCTGGA AAACAACTGA
 
Protein sequence
MAGRVIINEF LSNTKKMAEK RNIFLVGPMG AGKSTIGRQL AQQLNMEFFD SDQEIERRTG 
ADVGWVFDLE GEEGFREREE KIINELTEKQ GIVLATGGGS VKSRETRNRL SARGVVVYLE 
TTIEKQLART QRDKKRPLLQ VENPPREVLE ALARERNPLY EEIADVTIRT DEQSAKVVAN 
QIISMLENN