| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0300 |
|---|
| Symbol | |
|---|
| ID | 8088535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 344347 |
|---|
| End bp | 344826 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644834368 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002985939 |
|---|
| Protein GI | 242237758 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2731] Beta-galactosidase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.280318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT GCGATCAACA GGATTGGAGC CGGGAAAAAT ATGCGCTGCA TCCGATTATT
CACCAGGCCA TCCATTATAT TTCCACCACG GATTTCGCCA CGATGGAAAC CGGGAAATAT
GACATTATTC CCGGAAAGAT GTTCTGTTTA TTACAGGAAT TCACCACCGA GCCGGTAGAG
AACAGGCTGG CGGAATCGCA CTTCCAGTTT GTTGATATTC AATATTTATT ACAGGGGGAG
GAAACCATCG GTGTCGCCCG GGGAAGCCGG AATAACACCA TTATCGACGA TAAAAAAGCA
ACCAACGATA TTGTCTTTTA TCGTGATATT CACAATGAAA GTCTTATTAC ATTAATACCC
GGCATGTTCG CCGTTTTCTT TCCGGAAGAT CTGCACCGGC CATGCTGCCA ACGCCGGGAG
CCTTCTTTTA TTCGCAAAGC GGTTATTAAA ATCCACATCA GTTTATTTAC GGATTGCTGA
|
|---|
| Protein sequence | MIICDQQDWS REKYALHPII HQAIHYISTT DFATMETGKY DIIPGKMFCL LQEFTTEPVE
NRLAESHFQF VDIQYLLQGE ETIGVARGSR NNTIIDDKKA TNDIVFYRDI HNESLITLIP
GMFAVFFPED LHRPCCQRRE PSFIRKAVIK IHISLFTDC
|
|---|
| |