Gene Dd703_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0276 
Symbol 
ID8088511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp312380 
End bp314065 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content58% 
IMG OID644834344 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_002985915 
Protein GI242237734 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATC AATTGGATCT GATTTTATTA TTATTGCAGC AGATGTGCGT CTATCTGGTC 
ATTGCCTACC TGCTGAGTAA AACGCCGCTA TTCATTCCCC TGATGCAGAT TACCATCCAG
CTGCCGCACA AGCTGGTGTG TTATCTGGTG TTCTCGCTGT TCTGCATTCT TGGTACTTAT
TTCGGCCTGC GCATCGACGA CGCCATCGCC AATACCCGTG CTATCGGCGC GCTGCTGGGC
GGCGTGCTGG GCGGCCCGGC GGTGGGGTTG CTGGTCGGGC TGACTGGCGG GCTGCACCGC
TATTCGATGG GCGGTATGAC GGCGTTCGCC TGCATGCTGT CGACCATGAT GGAGGGCGCG
ATCGGCGGGT TGCTCAACCA CTGTATGACC CGACGCAACC GGGTCGACCT GTTGTTCCAG
CCGCAGGTAA TCGCGGCGAC CGCACTGTTG GCGGAAATTC TGCAGATGGG CATTCTGCTG
GCGGTATCCC GCCCTTTCGA CACCACATTC GCGTTGGTGA AAAACATTGC GCTGCCGATG
ATCATCGCCA ATTCGATAGG CGCGGCGATG TTTATGCGCA TCCTGCTCGA CCGCCGGGCG
ATGTTCGAGA AGTACACCAC CGCGTTTTCC ACCAAGGCGC TGAAAATCGC AGCCAAGGCC
GAGGGCATAC TGCGGGAGGG GTTCACCCCA CAAACCAGCA TGCGCGTCGC CCGCATCCTG
TATAAAGAAC TGGGCGTCGG CGCCGTCGCG ATTACCGACC GGGAAAAATT GCTGGCGTTT
ATCGGTATCG GCGAGGATCA CCACATCGTC GGCTCGCTGA TCTCTTCGCC CCACACCACC
AAAGCCATCG AACTCAACCA GGTGGTCTAC GCCGACGGCA GCGAGCAGCC GTTCCGCTGC
CCGCACTCGC CCCGCTGCCG GTTAGGATCG ACGCTGGTGA TCCCGCTGCG GGGCGAAGCG
CAACAGGTTT TAGGCACCAT CAAATTGTAT GAACCGAAAA ACCGGCTGTT TTCCAGCATC
AACCGCACAC TGGGAGAAGG CATCGCGCAT TTACTCTCCG CGCAGATCTT CGCCGGGCGT
TTTGAGCAAC AGAAGCTGTT GCTGATCCAG TCGGAAATCA AGCTGCTGCA CGCGCAGGTC
AACCCCCATT TTCTGTTCAA CGCGCTCAAC ACGCTCTCGA CGGTCATCCA TCGGAATCCG
GAGCACGCCC GCTCCCTGGT ATTGTCGCTG GCGACCTTCT TTCGTAAAAA CCTTAAACGC
AGCGGCGATG AAGTATCGCT CGGCGACGAA CTAGAGCACG TCAACGCCTA TCTGGACATT
GAACAGGCGC GCTTCGCCAA CCATCTGACG GTGCAAATCA ACATTCCCCG TGTCTTGATG
ATGGCGCGCC TGCCCGCCTT TTCACTCCAG CCGCTGGTGG AAAATGCCAT CAGACACGGC
ATTTCCCACA TGCTGGAGGA CGGCGTATTG CGGATAGAAG CCCGGCCGCA CGCGAACTGT
CTGGAAGTCA CCGTAGAAGA CAACGCCGGC GCCTATCACC CGCGCAACGG CAGCGATGGG
TTGGGCATGA ATCTGGTGGA TAGGCGCATC AAGGCGCATT ACGGCTGCGG TTATGGCATT
ACGGTCAACA GCGAACCGGA TCACTTCACC CAGGTGCGCA TCCGGGTTCC GCTGCAATTG
GGCTAA
 
Protein sequence
MFDQLDLILL LLQQMCVYLV IAYLLSKTPL FIPLMQITIQ LPHKLVCYLV FSLFCILGTY 
FGLRIDDAIA NTRAIGALLG GVLGGPAVGL LVGLTGGLHR YSMGGMTAFA CMLSTMMEGA
IGGLLNHCMT RRNRVDLLFQ PQVIAATALL AEILQMGILL AVSRPFDTTF ALVKNIALPM
IIANSIGAAM FMRILLDRRA MFEKYTTAFS TKALKIAAKA EGILREGFTP QTSMRVARIL
YKELGVGAVA ITDREKLLAF IGIGEDHHIV GSLISSPHTT KAIELNQVVY ADGSEQPFRC
PHSPRCRLGS TLVIPLRGEA QQVLGTIKLY EPKNRLFSSI NRTLGEGIAH LLSAQIFAGR
FEQQKLLLIQ SEIKLLHAQV NPHFLFNALN TLSTVIHRNP EHARSLVLSL ATFFRKNLKR
SGDEVSLGDE LEHVNAYLDI EQARFANHLT VQINIPRVLM MARLPAFSLQ PLVENAIRHG
ISHMLEDGVL RIEARPHANC LEVTVEDNAG AYHPRNGSDG LGMNLVDRRI KAHYGCGYGI
TVNSEPDHFT QVRIRVPLQL G