| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0262 |
|---|
| Symbol | |
|---|
| ID | 8088497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 296516 |
|---|
| End bp | 297478 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644834330 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002985901 |
|---|
| Protein GI | 242237720 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.663455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTT TTCTGGCCAA TCGCATACTG CAGACGATCG TAGTGCTGTT TCTGGTGGCG
ACGGTCGTGT TCCTGATCAC CCGGATTATT CCGGGCGATC CGGCGACCAT CATGCTCGGG
CCGCAGGCCA GCGTGGAGGC GGTGCACGAG CTGCGGGTCA AACTGGGGCT CGACCGTTCG
CTGCTGACGC AATATCTGCT GTTCCTGCGC GACCTGCTGC GCGGCGACCT GGGGTATTCC
ATCTACTACG GCGACAGCGT GATCAACCTG ATCCTGGAAC GCCTGCCCAA TACCTTGCTG
CTCGGCGGTT TTGCATTAAC GCTGGCGCTG CTGGTCGCTA TCCCGGCGGG CATTATTTCC
GCCGTGCGCC AGCACAGCCT GTTCGACTAC GCTAGCGTAC TGTTTGCGCT GATCGGCGTA
TCCATGCCGG TGTTCTGGCT GGGGCTGCTG TTGGTACTGT TGTTCTCCGT GCGGCTGGCC
TGGTTGCCCG CCACCGGCAT GGGCGACTGG GACGACGGTT TTATGGATGT GCTGGGTCAC
CTGATCCTGC CCGGCGTGGC GCTTTCCACC GTGCCGATGG CGACATTCGT GCGCATCACC
CGCACCGCCA TGCTGGAAGT GATCAACGCC CCTTACATCC GTACCGCGCG CGCCAAGGGG
CTGTCCGAGT TTTCCGTCAT CGGCAAGCAC GCATTTCGCA ACGCCTTCAA CCCGATCCTC
ACCGTGTTGG GCATCCAGAT TTCTACCCTG CTCAGCGGTG CGGTACTGAC GGAAACCATC
TTCGCCTGGC CGGGCATGGG GCGGCTTATC ATCAGTTCGA TTGAAAAACG CGACTTCATG
GTGGTGCAGG GCACCATTAT GTTCACCGCG CTGATCTTCG TGGTGGTCAA TACCTGCGTC
GATCTGCTGT ACGTGGTGGT GAACCCCAAA ATCGGCCTCA ATAATCCGCG GGGGGACGCC
TGA
|
|---|
| Protein sequence | MIRFLANRIL QTIVVLFLVA TVVFLITRII PGDPATIMLG PQASVEAVHE LRVKLGLDRS
LLTQYLLFLR DLLRGDLGYS IYYGDSVINL ILERLPNTLL LGGFALTLAL LVAIPAGIIS
AVRQHSLFDY ASVLFALIGV SMPVFWLGLL LVLLFSVRLA WLPATGMGDW DDGFMDVLGH
LILPGVALST VPMATFVRIT RTAMLEVINA PYIRTARAKG LSEFSVIGKH AFRNAFNPIL
TVLGIQISTL LSGAVLTETI FAWPGMGRLI ISSIEKRDFM VVQGTIMFTA LIFVVVNTCV
DLLYVVVNPK IGLNNPRGDA
|
|---|
| |