| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0254 |
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| Symbol | |
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| ID | 8088489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 287951 |
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| End bp | 289579 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644834322 |
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| Product | Oligopeptide transporter OPT superfamily protein |
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| Protein accession | YP_002985893 |
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| Protein GI | 242237712 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCAGT TGTCATCATC AGACGTGAAC GCCGGATCGC ACACCGGTGC GCATCCTCGC
GCTTTTGCAC CCGGCACCTT ATTGCTGTTG TTGGCGCTTA GCATCTTTGG GGCGATTGTC
GGCGTACAGT TGCTGACTAC GCTAGGCGTC ACGCCCAATA CGTCGATTAT CGGCGCCATG
ATGGCGATGA TTGTGGCCCG TATTCCGTTG CAGAGCATGG CGCGCTTCCG CTCCGTACAT
ATCCAGAATT TGGCGCAGAG CGCCACCTCC GCCGCGACGT TCGGCGCCGC CAATTCACTG
TTGCTGCCGA TCGCCATTCC CTGGTTGTTC GGGCGCCAGG ACTTGGTGAT GCCGATGTTT
TTCGGCGTCG CGCTGGCGAT GCTGCTGGAC GGCTACATGC TGTATCGCCT GTTTAACACC
CGTATCTTCC CCGCCGAAGG CGCCTGGCCG CCGGGGATCG CGGTGGCGGA ATCCATCAAG
GCCGGCGACA AAGGGGGCCG TCAGGCAGGG CTGTTGGGTA TCGGCATCGC CATCGGCGTG
TTCGGCGCCT GGTTGAAGTT CCCCATTGCT GCGTTAGGGA CGGCCTTTAT CGGCAACATC
TGGGCGCTGG CGATGTTGGG TATCGGTTTC CTGCTGCGCG GTTATTCCCT GCCGCTGCTG
GGCGTGGACA TCAACCAGCA CTACATTCCG CACGGCATCA TGGCCGGCGC AGGCGTGGTG
GCGTTATTCC AGATTATCAA ACTGATGCGT AATCGCGACG GCGGCGGCAG CGCCGTTAAC
CAGACGCAGA CACAGGCGCT GTCTGCTTCT CAGGGCGAGG CCATCGGCAA AACCATGCGG
TTGGGGGCGG TGGGGTTTAT CGTCATCTCC GCGTTGATCG CGCTTGGCAG TGGTCTGTTC
AGCCAAATGT CGCTGCCCTG GATCCTGGCT TTCGTACTGT ATGCCGCCCT TGCCGCGTTT
CTGCATGAGG TGATTGTCGG GCTGGCGGCG ATGCACTCCG GCTGGTTCCC GGCCTTTGCG
GTCGCGCTGA TCACGCTGCT GATCGGGATT CTGATCGGCT TTCCGCCCGA AGCGCTGGTG
ATGCTGTGCG GATTTTCCGC CGCCACCGGC CCGGCGTTCG CCGATATGGG GTATGACCTA
AAGGCCGGTT TCATCCTGCG CGGCCGGGAC AGCGTCAGCC GGTTTGAACT GGAAGGCCGC
AAACAGCAGT TGTTGGCGGC GCTGCTGGCT TTCGTGGTCG CCATTCCGGT GGTGTTCTTT
ATTTATCGTG AATATTTCTC GGCCGGGCTG GTGCCGCCGG TCGCCAAGGT GTACGTCGCC
GCCATTCAGG CCGGCGTCTC GCCGGATATC GCCAAATCAC TGTTGCTGTG GGCGATCCCG
GGCGCATTGA TTCAACTGAT TGGCGGCCCT GGCCGCCAGA TGGGCGTGCT GCTGGCGACG
GGGCTGTTAA TCAACAACCC GCTGGCCGGT TGGGCGGTGA TGATCGGCAT CCTGATTCGG
GTGGTGGTGC TGCGGGTCAA AGGCGACGCG GCACGCAACC TGATGGAGGT ACTGGCCGCG
GGGTTGATCG CCGGCGATGC GCTGTTCAGT TTCTTCAACT CGATGTTGTC GCCGGGCCGC
AAAAAATAG
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| Protein sequence | MNQLSSSDVN AGSHTGAHPR AFAPGTLLLL LALSIFGAIV GVQLLTTLGV TPNTSIIGAM
MAMIVARIPL QSMARFRSVH IQNLAQSATS AATFGAANSL LLPIAIPWLF GRQDLVMPMF
FGVALAMLLD GYMLYRLFNT RIFPAEGAWP PGIAVAESIK AGDKGGRQAG LLGIGIAIGV
FGAWLKFPIA ALGTAFIGNI WALAMLGIGF LLRGYSLPLL GVDINQHYIP HGIMAGAGVV
ALFQIIKLMR NRDGGGSAVN QTQTQALSAS QGEAIGKTMR LGAVGFIVIS ALIALGSGLF
SQMSLPWILA FVLYAALAAF LHEVIVGLAA MHSGWFPAFA VALITLLIGI LIGFPPEALV
MLCGFSAATG PAFADMGYDL KAGFILRGRD SVSRFELEGR KQQLLAALLA FVVAIPVVFF
IYREYFSAGL VPPVAKVYVA AIQAGVSPDI AKSLLLWAIP GALIQLIGGP GRQMGVLLAT
GLLINNPLAG WAVMIGILIR VVVLRVKGDA ARNLMEVLAA GLIAGDALFS FFNSMLSPGR
KK
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