Gene Dd703_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0243 
Symbol 
ID8088478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp274962 
End bp275582 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID644834311 
Productthreonine efflux system 
Protein accessionYP_002985882 
Protein GI242237701 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.569169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGC TGTTTTTGAC CGTTGCGCTG GTACACCTGA TTGCGTTGAT GAGTCCAGGG 
CCGGATTTCT TTTTTGTTTC CCAAACTGCG ATTAGCCGCT CCCGCGGCGA AGCCTTGATG 
GGGGTGCTGG GCATCACGCT GGGCGTGGTG GTGTGGGCGG CGATTGCGTT GATGGGCCTG 
CATTTGTTGC TGGAACAGAT GACCTGGCTG CACCGTATCG TGACTGTTGG CGGCGGCCTG 
TACCTGTGCT GGATGGGATG GCAGATGCTG AGCTCCGCTC GTCGTCATAA CCCGCATCAG 
GATGACGAAC CGGAGGTTGC CTTGCCGCAG CAGGGGAAAG CCTTTATACG CGGGCTGATA 
ACCAACCTTT CCAATCCTAA AGCGCTGATT TATTTCGGTA GCGTGTTCTC TTTGTTCGTC 
GGGGATGAGG TGGGCGCCGG CGCTCGCTGG GGGCTGTTCG CGCTGATTTC GTTGGAAACC 
TTGCTGTGGT TTTCGCTGGT GGCGGTTGTT TTTGCACTGC CGGTGATGCG GCGGGGCTAT 
CGCCGGTTGG CGAAGTGGGT GGACGGCGTG GCTGGCGTAC TGTTCGCCGG ATTTGGCATA 
CACCTGATTA TTTCACGCTA A
 
Protein sequence
MLMLFLTVAL VHLIALMSPG PDFFFVSQTA ISRSRGEALM GVLGITLGVV VWAAIALMGL 
HLLLEQMTWL HRIVTVGGGL YLCWMGWQML SSARRHNPHQ DDEPEVALPQ QGKAFIRGLI 
TNLSNPKALI YFGSVFSLFV GDEVGAGARW GLFALISLET LLWFSLVAVV FALPVMRRGY 
RRLAKWVDGV AGVLFAGFGI HLIISR