| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0240 |
|---|
| Symbol | |
|---|
| ID | 8088799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 271394 |
|---|
| End bp | 271864 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002985879 |
|---|
| Protein GI | 242237698 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.368257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA TGATATTGAC ACCGGATAGC GTACATCAAT ACGTCAGCGA GCTGTTCGTC
CACCAAATGC CGTTCAATCA GGAATTGGGG CTGGAACTGA TCACATTCAC ACCGGATTCC
GCCACCTTGA GGTTTCGTCA TCAGCCCCGG CTGGAAGGCA ATGTGTTGCA ACATATTCTG
CACGGCGGCG TCATTGCTGC CGGGTTGGAC GTCGCCGCCG GGCTGGTGTG CGTCGGCCAT
GCATTGCTGC GTCATCCCCA ACTGACCGAA CAGGAATTGC GCCGACGGCT GTCCCGCATG
GGCACTATCG ACCTGCGGGT CGACTATCTG CGCCCTGGTT ACGGCGACCT GTTTACGCTG
ACCAGCCATC TGATGCGCGG CGGCAACAAA ATCGCCGTCG CTCGAGCCGA GCTCCATAAC
GAGCGTCACC AACATATCGC CAGCGCAGTC GCCACTTACA TCGTGGGCTA A
|
|---|
| Protein sequence | MENMILTPDS VHQYVSELFV HQMPFNQELG LELITFTPDS ATLRFRHQPR LEGNVLQHIL
HGGVIAAGLD VAAGLVCVGH ALLRHPQLTE QELRRRLSRM GTIDLRVDYL RPGYGDLFTL
TSHLMRGGNK IAVARAELHN ERHQHIASAV ATYIVG
|
|---|
| |