| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0234 |
|---|
| Symbol | xerC |
|---|
| ID | 8088793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 263975 |
|---|
| End bp | 264883 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644834302 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_002985873 |
|---|
| Protein GI | 242237692 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC CATCCCCCCT TGTCATACCG GTCAATGCCT TTCTTCGCTA TCTGCGTGTA
GAGCGTCGGC TCAGCCCATT GACGTTGCGC AGCTATCAGC ATCAGTTGCA GGTTATCGCA
TCGACTCTTG AAGAGAGCGG CATAAGCGAC TGGCGCCGGC TGGACGCCGC CGGTGTGCGT
TCGCTGGCGG CGCGCGGCAA GCGCGACGGG CTCAGTGCCG CCAGCCTGGC CCAGCGTCTG
TCTGCTCTGC GCAGTTTCCT TGACTGGTTA GTGAGTCGGG GCGAACTGAG CGCCAACCCG
GCGCGTGGCG TATCCGCACC CAAAGCGGGG CGCCATTTGC CGAAGAATAT GGATGTGGAT
GAGACGGATC GCCTGTTGGC GATCGACCTG AATGATCCAT TGGCCGTCCG TGACCGGGCC
ATGTTGGAGG TCATGTATGG CGCCGGTTTA CGTCTGGCGG AGCTGGTAGG GCTTGATTGC
CGTCATCTTG ATCTGGCGGA CGGCGAAATC TGGGTGTTGG GAAAAGGCAG TAAAGAGCGC
CGTCTGCCGA TAGGCGCCAC TGCGGTGGCC TGGTTGCGGC GCTGGCTGGA TGTGCGTGAA
ATTTATGCGC CGGACGATGA TGCCGTCTTT GTTTCCAGCC GGGGAAAGCG AATCTCAATG
CGGAACGTAC AGAAACGCTT TGCTGAATGG GGGGTGAAAC AAGGTATCAG CAGCCATGTT
CATCCTCATA AACTGCGACA CTCTTTCGCG ACGCATATGC TGGAATCCAG CGGTGATTTG
CGCGCGGTGC AGGAATTGCT TGGCCATGCC AACCTGTCGA CCACCCAAAT CTATACCCAC
CTTGACTTTC AACATCTGGC ATCGGTGTAC GATGCCGCGC ATCCGCGTGC CAAACGAGGA
AAATCCTGA
|
|---|
| Protein sequence | MTAPSPLVIP VNAFLRYLRV ERRLSPLTLR SYQHQLQVIA STLEESGISD WRRLDAAGVR
SLAARGKRDG LSAASLAQRL SALRSFLDWL VSRGELSANP ARGVSAPKAG RHLPKNMDVD
ETDRLLAIDL NDPLAVRDRA MLEVMYGAGL RLAELVGLDC RHLDLADGEI WVLGKGSKER
RLPIGATAVA WLRRWLDVRE IYAPDDDAVF VSSRGKRISM RNVQKRFAEW GVKQGISSHV
HPHKLRHSFA THMLESSGDL RAVQELLGHA NLSTTQIYTH LDFQHLASVY DAAHPRAKRG
KS
|
|---|
| |