| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0232 |
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| Symbol | dapF |
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| ID | 8088791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 262456 |
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| End bp | 263280 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644834300 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002985871 |
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| Protein GI | 242237690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.596238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTTT CCAAAATGCA CGGTTTGGGC AACGATTTTA TGGTTGTCGA TGCCGTAACG
CAGAATGTCT ACTTTTCGCC GGAGTTGATC CGCCGGCTGT CGGATCGACA CTGTGGCGTG
GGATTCGATC AGTTGCTGAT CGTCGAACCG CCTTATGATC CTGAACTGGA TTTTCATTAT
CGCATCTTTA ATGCAGACGG CAGCGAAGTT GCTCAATGCG GCAACGGCGC GCGCTGTTTT
GCTCGTTTCG TTCGTCTCAA AGGGTTGACC AACAAACGTG ACATCAATGT CAGTACGCAC
AATGGGCGTA TGGTTCTTTC CGTGACGGAA GACGAATTGG TGCGCGTCAA CATGGGAGAA
CCCAATTTTG AGCCGCAACA GGTGCCGTTT CGTGCGGCTA AGTCGGAGAA AACCTACATC
CTGCGGGTGG CCGAGCGCAC TGTGATGTGC GGCGTCGTTT CCATGGGGAA TCCGCATTGC
GTGATTCAGG TGGAGAATGT GGATACCGCG CCGGTTGAAA CATTGGGGCC GTTGTTGGAA
AGCCATGAGC GTTTCCCTGA ACGCGCTAAT ATTGGTTTTA TGCAGATAAT CAATCGCAAT
GCGATTCAGT TGCGGGTATA TGAACGCGGT GCCGGAGAAA CCCAGGCCTG CGGCAGCGGT
GCGTGCGCAG CGGTCGCCGT GGGGATTCAG CAAGGGCTGC TGGCGGCGGA CGTTAATGTC
CGGCTACCGG GCGGTGAACT GAATATACAT TGGGATGGCC CCGGAAACCC GCTGTTCATG
ACTGGCCCGG CGACACACGT CTATGATGGA TTTATTCATC TATGA
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| Protein sequence | MQFSKMHGLG NDFMVVDAVT QNVYFSPELI RRLSDRHCGV GFDQLLIVEP PYDPELDFHY
RIFNADGSEV AQCGNGARCF ARFVRLKGLT NKRDINVSTH NGRMVLSVTE DELVRVNMGE
PNFEPQQVPF RAAKSEKTYI LRVAERTVMC GVVSMGNPHC VIQVENVDTA PVETLGPLLE
SHERFPERAN IGFMQIINRN AIQLRVYERG AGETQACGSG ACAAVAVGIQ QGLLAADVNV
RLPGGELNIH WDGPGNPLFM TGPATHVYDG FIHL
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