| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0226 |
|---|
| Symbol | |
|---|
| ID | 8088785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 256038 |
|---|
| End bp | 257162 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644834294 |
|---|
| Product | putative uroporphyrinogen III C-methyltransferase |
|---|
| Protein accession | YP_002985865 |
|---|
| Protein GI | 242237684 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC ACGTTACCCC CTCAACGCCT TCTGAAGAGG TTGTCGAACG GGTTGAACCC
GCGCATCCGC AGAAATCACC GACACCACCG GCCCGTCAGG GTATTGTACC GTGCGCTGTC
GCTATCGTCG TCGCGCTGGC GCTGAGCGGC GGCGTTTACT ATTACGCCCA TCAACAGCTA
CAACGCCAGT CGACGGAAAC AGCCCTTCTG CAAGAGCAAA TCGTCGCCTT GCAGAAGCAA
CAGACGCAAT CCCAACAGCA ATGGCAGCAG GCGCAGGAAC AGCAGAGCAA GATACAGAAT
GCGGATGAAC AACGTCTGGC GGCGTTGGCC CGCCAGGCGG GAGAGATGCA GGAAAAACTG
GCTACGCTGT CCAACAGCGA CGCCAAAACC TGGCTACTGG CGCAGGCAGA CTTTCTGGTT
AAACAGGCCG GGCGTAAATT ATGGAGCGAT AAGGACGTCA CCACCGCCGG CGCGTTGCTG
AAAAGCGCCG ATACCAGTCT GGCGGAGATG AACGACCCCA GTCTGCTCGA TGTCCGCCGC
GCCATCACTC ATGACATCAA CCAGTTAGCG AACATCAGCC AGATCGATTT CGACGGCATC
ATCCTTAAGG TCAATCTGCT GGCGGATCAA GTAGACAACC TGCGGCTGGC GGATACCGAG
AGCAGCAACG ATGAACCCAT GGAAGAAAAC GATACCACGC TGTCGGCCTC CCTCAGCGAA
TGGCGCCAGA ATTTGAGTAA AAGCTGGCAT AACTTCCTGT CCGATTTCAT TACCATCCGC
CGCCGGGATA ACACGGCTGA GCCGCTGCTG GCGCCGAATC AGGACGTCTA TCTGCGCGAA
AACATCCGCT CCCGCCTGTT AATTGCCGCA CAGGCGGTTC CACGCCACCA GAATGAAACT
TACAAACAAT CGCTGGAAAC GGCCGCAACC TGGATTCGCG CCTATTTTGA CGAAGAGGAT
CCCACGACCA AAGCGTTTCT CGAACAGTTG GATATGTTAA GCCAGCAATC GATAACCATG
GACTTGCCGA CCGAGTTGCA GAGCCAGCCG TTACTTGAAC AACTGATGCA AACCCGGGTT
CGCAACCTGC TGACTCAACC GGCTGCAACC CCACGGGAGG GCTGA
|
|---|
| Protein sequence | MTEHVTPSTP SEEVVERVEP AHPQKSPTPP ARQGIVPCAV AIVVALALSG GVYYYAHQQL
QRQSTETALL QEQIVALQKQ QTQSQQQWQQ AQEQQSKIQN ADEQRLAALA RQAGEMQEKL
ATLSNSDAKT WLLAQADFLV KQAGRKLWSD KDVTTAGALL KSADTSLAEM NDPSLLDVRR
AITHDINQLA NISQIDFDGI ILKVNLLADQ VDNLRLADTE SSNDEPMEEN DTTLSASLSE
WRQNLSKSWH NFLSDFITIR RRDNTAEPLL APNQDVYLRE NIRSRLLIAA QAVPRHQNET
YKQSLETAAT WIRAYFDEED PTTKAFLEQL DMLSQQSITM DLPTELQSQP LLEQLMQTRV
RNLLTQPAAT PREG
|
|---|
| |