Gene Dd703_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0217 
Symbol 
ID8088776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp245875 
End bp246642 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content50% 
IMG OID644834285 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002985856 
Protein GI242237675 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAATCTTATC AGCATTCGCA TTCGCAGCTG CTTTACTGAT GGCGGGTTGT 
GATTCTCAAA AAGATGACAA AGTTTTGCGC GTTGGCGCAA CCGGTCAGAG CTACCCCAGC
GCGTTCAAAC AGGACAACAA GCTGGTGGGG TTTGATGTGG AAGTGACGGA AACCATCGCT
AAGGATTTGA ATTACAAAGT TGAGTGGGTT ACTGCGGACT TCAGCGGCCT GATGGGCCAA
CTGGAAGCCA AAAAACTCGA TACCATCGCC AACGTGGTAG CCATCACCCC TGCGCGCGAG
GAAAAATACA ATTTTTCCCA ACCTTACAGC TACTACGGCA GTCAGATTGT GACCCACAAG
GATAATACCG GCATCAACAC GCTGGATGAT CTGAAAGGGA AAACCGTGGC GGGCGTTTTG
GGTTCCAATC ACGTTAACAA CCTGAAAAAG GCGTTTGCCG ACGGCAGCGT CAATATTCGT
ACTTACGAAA CCCGCGATGG TGCGATGAGC GATGCACTCG CCAAACGGGT GGACGGTTAT
ATCAACTCCC GCCCGATTCT GCTGGCGGAG ATCAACAAGC GTAATCTGCC GTTTAAGATG
GTCGGTAGTC CGCTGGTGGT GGAAAAAGTC GGCTTCCCGT TCCAGAAAGA TGAGAAAGGA
AACGCGCTGC GCAAACAGTT TGACGATGAA CTGAGTAAAA TGCGTACCGA CGGCCGTCTG
AAGGCGCTGT CTGTGAAATA TTTTGGTGAG GATATCACTG CGGGCTAA
 
Protein sequence
MKKIILSAFA FAAALLMAGC DSQKDDKVLR VGATGQSYPS AFKQDNKLVG FDVEVTETIA 
KDLNYKVEWV TADFSGLMGQ LEAKKLDTIA NVVAITPARE EKYNFSQPYS YYGSQIVTHK
DNTGINTLDD LKGKTVAGVL GSNHVNNLKK AFADGSVNIR TYETRDGAMS DALAKRVDGY
INSRPILLAE INKRNLPFKM VGSPLVVEKV GFPFQKDEKG NALRKQFDDE LSKMRTDGRL
KALSVKYFGE DITAG