Gene Dd703_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0202 
Symbol 
ID8088757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp228431 
End bp229717 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID644834266 
ProductATP-dependent RNA helicase RhlB 
Protein accessionYP_002985841 
Protein GI242237660 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA CACACTTAAC CGAACAGAAG TTTTCCGACT TCGCGCTGCA CCCGCTGGTT 
ATCGAAGCGC TTGAAAGTAA AGGGTTTCAT AACTGCACCC CGATTCAGGC ATTGGCACTG
CCGCTGACTT TGTCAGGGCG TGACGTAGCA GGACAAGCGC AAACCGGTAC TGGCAAGACG
CTGGCGTTTC TGGCGTCTAC TTTTCATCAT TTGCTTTCCC ATCCGGCTCT CGCTGATCGT
CAGGTCAATC AACCTCGCGC ACTGATAATG GCGCCAACCC GCGAACTGGC TGTCCAGATC
CATACGGACG CGGAAGCGCT CGCTCGAGTG ACCGGCTTCA AACTGGGACT CGCCTACGGC
GGCGACGGTT ATGACAAACA GTTGAAGGTG CTGGAAAACG GCGTCGACAT TCTTATCGGC
ACAACCGGCC GGCTAATCGA TTACACCAAA CAGAACCATG TCAATCTGGG CGCTATCCAG
GTTGTGGTAC TGGACGAAGC CGACCGCATG TACGACCTCG GCTTTATCAA AGATATCCGA
TGGTTGTTCC GCCGCATGCC TTCCGCGAAC CAGCGTCTGA ATATGCTGTT TTCCGCTACA
TTGTCTTATC GTGTACGCGA ACTGGCGTTC GAACAGATGA ACAACGCCGA ATATGTGGAA
GTCGAACCCG AGCAGAAAAC TGGCCACCGC ATTAAAGAAG AACTGTTCTA TCCTTCTAAC
GAAGAAAAGA TGCGCCTGCT GCAGACGCTG ATCGAAGAAG AGTGGCCTGA CCGCTGCATC
GTGTTCGCCA ATACCAAACA CCGCTGTGAA GAAATTTGGG GTCATCTGGC GGCCGACGGC
CATCGCGTAG GACTGCTGAC CGGCGATGTC GCGCAGAAGA AACGGTTGCG TATTCTAGAA
GAATTCACCC ACGGCAATCT GGATATCCTG GTCGCAACCG ACGTAGCGGC TCGTGGGCTG
CACATTCCTG CGGTAACGCA CGTATTCAAC TACGATCTGC CGGACGACTG CGAAGATTAT
GTTCATCGCA TCGGGCGAAC CGGTCGCGCG GGCGCCAGCG GTTATTCCAT CAGTCTGGCC
TGTGAAGAAT ATGCGCTGAA CCTGCCAGCT ATCGAAACCT ATATCGGCCA CAACATCCCG
GTAAGCAAAT ATAACAGCGA CGTGCTGTTG AATGATTTGC CGGAACCCAA ACGCCTGAGT
CGCCCGCGTT CCACCGGAGG CCCGCGACGT CCCGGCGCTC CCCGTCGTAG CGGCGCTCCC
CGTAACAACC GAAAACGCCC GGGCTGA
 
Protein sequence
MSKTHLTEQK FSDFALHPLV IEALESKGFH NCTPIQALAL PLTLSGRDVA GQAQTGTGKT 
LAFLASTFHH LLSHPALADR QVNQPRALIM APTRELAVQI HTDAEALARV TGFKLGLAYG
GDGYDKQLKV LENGVDILIG TTGRLIDYTK QNHVNLGAIQ VVVLDEADRM YDLGFIKDIR
WLFRRMPSAN QRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPEQKTGHR IKEELFYPSN
EEKMRLLQTL IEEEWPDRCI VFANTKHRCE EIWGHLAADG HRVGLLTGDV AQKKRLRILE
EFTHGNLDIL VATDVAARGL HIPAVTHVFN YDLPDDCEDY VHRIGRTGRA GASGYSISLA
CEEYALNLPA IETYIGHNIP VSKYNSDVLL NDLPEPKRLS RPRSTGGPRR PGAPRRSGAP
RNNRKRPG