| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0200 |
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| Symbol | |
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| ID | 8088755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 224944 |
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| End bp | 226761 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644834264 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_002985839 |
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| Protein GI | 242237658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAC CCTCACTACC CCGGAATACG TTCTGTCTGG CAACGTTGAT CCCGCTTCTA
CTGCTAGCGC CGCCGACTCT GGCGGCGTCC CGGCAGGCAC CGCAAAAACT ACAGGTTCCC
ACGCTGGCTT ACGACGATCA CAGCGTTGTA TTGGTGTGGG ACGCTCCGGA AGATACCGCC
GCAATTACCG ACTATCAGGT TTACCAGAAT GGCCGGCTCG TCGGGCTGGC TAGCCAAATC
GCCGACAAAT ACTCGCCAGC ACAGCCTTAC ATCACAGCGT TTTACCGTGC GGATACCCGT
AGTTTCCATC ATAAAATCGT GCTGCAGAAC GCCCGTATCG AAGGATTGAA AGCTGACACG
GAATACCGCT TCACCGTCCG CACGGTCTAT GCCGACGGCA CAGTGTCCGC AGATAGCAAC
GCTGTCGTGG CGAAAACCGC CGCACCGCCG CAGATAATCA ACATCACGCA CTACGGCGCC
AAAGGCGACG GCACGACACT CAATACCACT GCCATTCAGA ACGCCATCAA CGCATGTAAC
ACCGGCTGTC GTATCGACAT ACCGGCAGGC GTATTTAAGA CCGGCGCGTT GTGGCTGAAA
AGCGACATGA CCCTGAATCT GATGGAAGGC GCCACGCTGC TGGGTTCAGA AAACGCGGCG
GATTACCCCG CAGCCTATCA GATTTACAGC TATTCATCCC AGATGCGCCC GGCATCGCTG
CTGAACGCCA TCGATAAACA CCATTCCACC GTCGGCACCT TTCAAAACAT TCGTATCATA
GGGAAAGGCG TTATCGACGG TAACGGCTGG AAGCGCGATA CCGCCACGGA GGCTAAGGAT
GAAACCGGAG CGGTGATTCC CCATTACGTG AAAAGCAACA ACAGCAAAGT CGGCAAGGAC
GGCATACTGG CCAGCAGTCA GGTGGCTGCC GCCATTGCCG ACGGCCTGGA CGCTAAAACT
GCCTATGGCC AGGCCCGCTC CAGCCTGATT ACGCTGCGCG GCGTGAAGAA CGTCTATCTT
GCCGACATCA CCATTCGCAA CCCGGCCTTC CACGGCATGA TGTTTCTGGA AAACCAACAT
GTGGTGGTTA ATGGCGTCAC CCACCACACT TACGACGCCA ACAACGGCGA CGGTATCGAG
TTCGGCAACA GCCAAGACAC TATGGTGTTT AACAGTGTGT TTGACACCGG GGACGACTGC
ATCAACTTTG CAGCCGGAAT GGGGAAATCA GCGGAACATC AGGAAGCGAC GCAAACCTCA
TGGCTGTTCA ACAACGCCTT TATTCATGGC CATGGCGCGG TTGTACTGGG TAGCCACACC
GGGGCTGGTA TCGCAGATGT CCTGGCGGAA AACAACGTCA TGAATCAGAC CGATATCGGT
TTGCGCGCAA AAAGCGCGAC CAGCATCGGC GGCGGCGCTC ATAACATTAC CTTCCGTAAT
AACGCCATGA AAAATCTGGC GAAACAGGCC GTTATCGTGA CGTTAAGTTA TAGCGACGCC
AACAGCACCA CCGACTACAC GCCAGCCGCC ACGTCGGCAC GTTTCTACAA CTTCATGGTG
AAAAACGTGA CGGTACAGAA TTCGACCGGC AAGAGCCCAT CCATTGATAT CACCGGCGAC
AGCAAAAACG GCATCTGGCA CAGCCAGCTG AACTTCAGCA ACATGAAACT GGACAACGTC
ATGCCAGTCG CCATCAGCGA CTTGGCCGAC AGCCAGTTCA CTCATCTCAC CTTCACCCAT
CTACAAAGCG GCAACACGCC GTGGAACTTC GGCGCGGTGA AAAACGTCAG CGTAGATGGC
AAAACCGTGA CGCCCTGA
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| Protein sequence | MSTPSLPRNT FCLATLIPLL LLAPPTLAAS RQAPQKLQVP TLAYDDHSVV LVWDAPEDTA
AITDYQVYQN GRLVGLASQI ADKYSPAQPY ITAFYRADTR SFHHKIVLQN ARIEGLKADT
EYRFTVRTVY ADGTVSADSN AVVAKTAAPP QIINITHYGA KGDGTTLNTT AIQNAINACN
TGCRIDIPAG VFKTGALWLK SDMTLNLMEG ATLLGSENAA DYPAAYQIYS YSSQMRPASL
LNAIDKHHST VGTFQNIRII GKGVIDGNGW KRDTATEAKD ETGAVIPHYV KSNNSKVGKD
GILASSQVAA AIADGLDAKT AYGQARSSLI TLRGVKNVYL ADITIRNPAF HGMMFLENQH
VVVNGVTHHT YDANNGDGIE FGNSQDTMVF NSVFDTGDDC INFAAGMGKS AEHQEATQTS
WLFNNAFIHG HGAVVLGSHT GAGIADVLAE NNVMNQTDIG LRAKSATSIG GGAHNITFRN
NAMKNLAKQA VIVTLSYSDA NSTTDYTPAA TSARFYNFMV KNVTVQNSTG KSPSIDITGD
SKNGIWHSQL NFSNMKLDNV MPVAISDLAD SQFTHLTFTH LQSGNTPWNF GAVKNVSVDG
KTVTP
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