| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0197 |
|---|
| Symbol | |
|---|
| ID | 8088752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 220742 |
|---|
| End bp | 222115 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644834261 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_002985836 |
|---|
| Protein GI | 242237655 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.274279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTGT GGGGCGGACG GTTCACGCAG GCAGCGGATC AGCGTTTCAA ACAGTTTAAT
GACTCACTGC GGTTCGATTA CCGTCTGGCG GAGCAGGACA TCGTCGGCTC CATTGGCTGG
TCGAAAGCGC TGGTGACGGT CAACGTGTTG ACCGTGCAGG AACAACAGCA ACTGGAGCAG
GCGCTCAACA CGCTGCTGGT AGAGGTGCAG GCTGACCCGC AGGCGATTTT GCACAGTGAT
GCCGAAGATA TTCACAGTTG GGTCGAGCAG CGGTTGATCG AGAAGGTCGG TGATTTAGGC
AAGAAACTGC ATACCGGGCG CAGCCGCAAT GATCAGGTCG CCACCGATCT GAAACTGTGG
TGCAAAGCGC AGGTCGGTGA AATGGTGCAG GCCGTCCGCC ATCTGCGCGC GGCGCTGGTG
GCCACCGCCG AAGTCAATCA GGACGCTGTC ATGCCGGGGT ATACCCATCT GCAGCGCGCC
CAGCCGGTGA CGTTCGCCCA CTGGTGTCTG GCTTACCACG AAATGTTGGT GCGTGATGAA
AGTCGTCTGG AAGACACGCT GAAACGCCTG GACGTCAGCC CGCTGGGCTG CGGCGCGCTG
GCGGGCACCG CTTATCCTAT TGACCGCGAG CAGTTGGCGG GCTGGCTGGG GTTCGCTTCC
GCCACCCGCA ACAGCCTGGA CACCGTTTCC GATCGCGACC ATGTGCTGGA ACTGTTGTCC
GATGCTTCTA TCGGTATGGT GCACCTGTCC CGGTTTGCGG AAGATTTGAT TTTCTTCAAC
AGCGGGGAAT CCGCGTTTGT GGAGCTGTCT GATCGCGTGA CATCCGGCTC GTCGCTGATG
CCGCAGAAGA AAAACCCGGA TGCGCTGGAA CTGATTCGCG GCAAGTGCGG CCGCGTGCAG
GGCGCGCTGG CGGGTATGCT GGTGACGCTG AAAGGTCTGC CGCTGGCCTA CAACAAAGAC
ATGCAGGAAG ACAAAGAAGG GTTGTTCGAC GCGCTGGATA CCTGGCATGA CTGCCTGTTG
ATGGCGGCGC TGGTGCTGGA AGGTATTCAG GTGAAACGCC CACGTTGTCA AGAAGCCGCC
GAGCAGGGCT ACGCCAACGC CACCGAATTG GCGGACTATC TGGTTTCCAA AGGGGTGCCG
TTCCGCGAAG CGCATCACAT CGTGGGCGAA GCGGTGGTGG AAGCCATTCG TCAGGGCAAG
GCACTGGAAG CGTTGCCGTT GTCCGAATTG CAGAAGTTCA GCGCGGTGAT TGGGGACGAC
GTCTATCCGT GTTTGTCGCT GCAATCCTGT CTGGAAAAAC GTGCTGCACA GGGCGGCGTC
TCGCCGCAAC AGGTGGCGCG CGCCATCGCC GAAGCGAAAC AGCGTCTGGC CTGA
|
|---|
| Protein sequence | MALWGGRFTQ AADQRFKQFN DSLRFDYRLA EQDIVGSIGW SKALVTVNVL TVQEQQQLEQ
ALNTLLVEVQ ADPQAILHSD AEDIHSWVEQ RLIEKVGDLG KKLHTGRSRN DQVATDLKLW
CKAQVGEMVQ AVRHLRAALV ATAEVNQDAV MPGYTHLQRA QPVTFAHWCL AYHEMLVRDE
SRLEDTLKRL DVSPLGCGAL AGTAYPIDRE QLAGWLGFAS ATRNSLDTVS DRDHVLELLS
DASIGMVHLS RFAEDLIFFN SGESAFVELS DRVTSGSSLM PQKKNPDALE LIRGKCGRVQ
GALAGMLVTL KGLPLAYNKD MQEDKEGLFD ALDTWHDCLL MAALVLEGIQ VKRPRCQEAA
EQGYANATEL ADYLVSKGVP FREAHHIVGE AVVEAIRQGK ALEALPLSEL QKFSAVIGDD
VYPCLSLQSC LEKRAAQGGV SPQQVARAIA EAKQRLA
|
|---|
| |