Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0173 |
Symbol | rfaD |
ID | 8088728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 191970 |
End bp | 192902 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644834238 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_002985813 |
Protein GI | 242237632 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.184185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCG TGACTGGCGG CGCCGGTTTC ATCGGCAGCA ACATCGTGAA GGCGCTGAAT GACGCCGGAC ACCGGGATAT TCTGGTGGTT GATAACCTCA AGGACGGCAC TAAATTCGTC AATCTGGTCG ATCTGGATAT CGCCGACTAC ATGGACAAAG AAGATTTCAT CGCCGGTATT ATGGCCGGCG ATGATTTTGG CGATATCGAT GCCGTTTTCC ACGAGGGCGC CTGCTCTTCC ACCACCGAGT GGGATGGCAA GTATATGATG GAAAACAACT ACCAATACTC AAAGGAGCTG CTGCACTACT GTCTGGAACG CAGCATTCCC TTCCTTTATG CGTCCTCCGC CGCCACCTAT GGCGGCCGGG TCGACAACTT CGTGGAAAAT CGCCAGTACG AACAACCGCT GAACGTCTAC GGCTATTCCA AATTCCTGTT CGATCAGTAC GTGCGCGACA TTCTGCCGGA TGCGGATTCT CAGGTATGTG GCTTCCGTTA TTTCAATGTC TACGGCCCGC GCGAAGGCCA TAAAGGCAGC ATGGCCAGCG TGGCGTTCCA TCTGAACAAC CAGATCAATC AGGGTGAAAA CCCGAAACTG TTCTCCGGCA GCGAGAACTT TAAACGTGAT TTCATCTACG TCGGCGATGT CGCCGCCGTC AACCTGTGGT TCTGGCAACA CGGCGTTTCC GGCATTTTCA ACTGTGGTAC TGGCCGCGCC GAGTCCTTCC AGGCGGTGGC CGATGCGGTA CTGGCGTACC ATCAGCAAGG CAGCCTGGAG TACATTCCTT TCCCGGAAAA ACTGAAAGGC CGCTATCAGG CATACACCCA GGCCGATCTG ACCAACCTGC GCGGCGCCGG CTATGACAAA CCGTTCAAAA CGGTGGCGGA AGGCGTGGCC GATTATATGG CCTGGCTGAA TCGCAGCGTC TGA
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Protein sequence | MIIVTGGAGF IGSNIVKALN DAGHRDILVV DNLKDGTKFV NLVDLDIADY MDKEDFIAGI MAGDDFGDID AVFHEGACSS TTEWDGKYMM ENNYQYSKEL LHYCLERSIP FLYASSAATY GGRVDNFVEN RQYEQPLNVY GYSKFLFDQY VRDILPDADS QVCGFRYFNV YGPREGHKGS MASVAFHLNN QINQGENPKL FSGSENFKRD FIYVGDVAAV NLWFWQHGVS GIFNCGTGRA ESFQAVADAV LAYHQQGSLE YIPFPEKLKG RYQAYTQADL TNLRGAGYDK PFKTVAEGVA DYMAWLNRSV
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