| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0168 |
|---|
| Symbol | |
|---|
| ID | 8088723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 186363 |
|---|
| End bp | 187565 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644834233 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_002985808 |
|---|
| Protein GI | 242237627 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC TCTCGTTTTC CCCACGACGT CCTGATAACC GCGTGATGTA TTTTCTGAGT
GCGCTGGCTA TTTTTGTCAA TCCGCTGTTC GAAGCCCCTA AAAATATTGT TATGGCCTCG
ATGCTGCTGT GGTTTTTCTA CAAAATAGGC ACGGACAGAC GATCTCGTCA TTGGTCCGGC
TGGGATACTT TTTTTATCCT TTATGTTTTG TCGTATGTCG TGGCGCTGCC GTTTTCCTAT
TACCACACCG ATATTCGTTC GTTGACGGAC GTGGCGCGTT ACATTTTGTT CGGCTGGCTC
ATCTATCGGG CCAACTTCAG CGCCCAGCAG AAATTGGGGC TGGTATTCTG GGCGGTGATG
GGGACGGTCG TCGGTCTGAT CTACGGCGCG TGGGATCATT ATTACCTCGA TCATGGGCAA
TTCTGGACGT TGAATTCGGT TGGCCACGTC AACCACGCCG CGATTTATAA CGCCATCATC
TGTGGTATGG CGTTGACGAC GCTGTTCAGT CACTGGACGT CATTTTCCGC CGGCCGCCGC
TTGTTATGGC TTGCCATGTT AGCGCTATGC CTGGTGTATG TAGCGTTTGG CGAAAGTCGG
GCGACGTTCG GCGCAATCCT GGCTGTCGTG TTGTTTTTGG GGCTTGGTTT CGCCAGAAAA
AGCAAAAAAT TCCTGTGGGT GCCTACGCTG TTTATCGTGG GGATGATCGG CGTGGCGATC
CTGAGCAATG CGCGCGTGGT GGTCAAGCAG GAACAAAATG ATCTAGAAAA CAATATGTTG
AGCTATCGGG ATACGATCTG GCGCTCTGCT TTTGATACCT TCAGGGAGCA TCCGTTGTTC
GGCGTAGGTA AGGAAAACTT CATCGAAGTC GGCATCAAAT GGCAAGGGGA AGTGATGTTT
CCTCATGTTT CTCATGCACA TAACATTTTC ATGAACGTGC TGGCGGAGAA TGGCATCTGG
GGCGAACTCT GGCTCCTGGG GCTGTTGGGC GCCATTGGTC TTTCGTTGTT GCGCTGTTTG
CCGAAGCGTA ACGCGATGCC GGTTTCCTGG CTATCCTGGG GGATGGCCTG CTCCGCGTTC
GGGATCACCG TGATTGTCGG TCTGGTGAAT ACGACGTTTC ATCATGAGCA TGCCAATTTG
GCCATGCTGT GTTTTGCGTT GTGGATCAGT CAGTACCGTT ATGATCGCCA GCGGTTTATC
TGA
|
|---|
| Protein sequence | MTQLSFSPRR PDNRVMYFLS ALAIFVNPLF EAPKNIVMAS MLLWFFYKIG TDRRSRHWSG
WDTFFILYVL SYVVALPFSY YHTDIRSLTD VARYILFGWL IYRANFSAQQ KLGLVFWAVM
GTVVGLIYGA WDHYYLDHGQ FWTLNSVGHV NHAAIYNAII CGMALTTLFS HWTSFSAGRR
LLWLAMLALC LVYVAFGESR ATFGAILAVV LFLGLGFARK SKKFLWVPTL FIVGMIGVAI
LSNARVVVKQ EQNDLENNML SYRDTIWRSA FDTFREHPLF GVGKENFIEV GIKWQGEVMF
PHVSHAHNIF MNVLAENGIW GELWLLGLLG AIGLSLLRCL PKRNAMPVSW LSWGMACSAF
GITVIVGLVN TTFHHEHANL AMLCFALWIS QYRYDRQRFI
|
|---|
| |