Gene Dd703_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0148 
Symbol 
ID8087569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp168994 
End bp169959 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content64% 
IMG OID644834214 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002985789 
Protein GI242237608 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAAA TGCAAATCGA AACGCTGGAA CTGCCGCTGG CGCGACCGTT CGCCATCTCC 
CGCGGCACCC GAACCGCCGT CACCGTGGTG CGGGTGACGC TGGAAGAGCG CGGGTTTATC
GGACGCGGCG AGTGCACGCC CACCGCTCAC TATCAGGAAA CGGCGCAGAG CGTCGCTGCA
CAACTGGAAT CGGTGCGTCA CGCGGTGGAA AACGGCATGA CGCTGGACGA ACTGCAACGC
CTGCTGCCGC CGGGCTCGGC CCGCAATGCG CTCGATTGCG CACTGTGGCG CCTGAACGCC
GCCCTGAGCA AGCAGACGCT GTGGCAATAC CTCGCCATTA CGCCGCCGCA GTCGATCATC
ACCGCCGAGA CCCTGAGTCT GGATAGCGTG GAAAAGATGA CGCATGCCGC CAAAGACGCG
GTATCTCGCG GCGCGCTGCT GCTGAAAATC AAACTCAACG GCGAACAGAT TCTGGAAAAA
GTGGCCGCGA TTCGCCAGGC GGCGCCGAAC GTCACCCTGA TCGTCGACGC CAACGAAGCC
TGGGGCGGGC AGGATCTGGA GCCATTATTA CGCCAGCTGG CCGCCTACCG TATTGCCATG
GTGGAACAGC CGCTGCCCGC CGGGCAGGAC GCGGCGCTGG CCGACTTCAC CCACGCCATT
CCGGTGTGCG CGGACGAAAG CTGTCACCAT TGCGGCGACA TCGCCGCGTT GCGTGATCGT
TACGAGATGA TCAACATCAA GCTGGACAAA TGCGGCGGTC TGACCGAAGC GCGAGCCATG
GTAGCGCTGG CCCGCGAACA GGGCATGCGT ATTATGGTGG GCTGTATGCT CGGCTCATCG
CTGGCGATGG AAGCCGCACT GCCGGTCGCG CTGAGCGCCG AGCATGTCGA TCTGGACGGC
CCCATCTGGC TGGCGGCGGA CAGTTCGCCC TACCTGACCT ATAACCTTGG CCGCATCTGG
CTATAA
 
Protein sequence
MRQMQIETLE LPLARPFAIS RGTRTAVTVV RVTLEERGFI GRGECTPTAH YQETAQSVAA 
QLESVRHAVE NGMTLDELQR LLPPGSARNA LDCALWRLNA ALSKQTLWQY LAITPPQSII
TAETLSLDSV EKMTHAAKDA VSRGALLLKI KLNGEQILEK VAAIRQAAPN VTLIVDANEA
WGGQDLEPLL RQLAAYRIAM VEQPLPAGQD AALADFTHAI PVCADESCHH CGDIAALRDR
YEMINIKLDK CGGLTEARAM VALAREQGMR IMVGCMLGSS LAMEAALPVA LSAEHVDLDG
PIWLAADSSP YLTYNLGRIW L