| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0118 |
|---|
| Symbol | |
|---|
| ID | 8087539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 135508 |
|---|
| End bp | 137271 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834184 |
|---|
| Product | PTS system ascorbate-specific transporter subunits IICB |
|---|
| Protein accession | YP_002985759 |
|---|
| Protein GI | 242237578 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.3499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCC TATATAGCAT CTTTTACATC TTCTACAGCC AGGTCATGAC CAAAGCGCCG
CTGCTGCTCG GTTTGGTCAC GTGTATCGGC TATCTGCTGC TGCGGCGCGA TACCACGACA
GTCATCAAAG GCACCACCAA AACCATCGTC GGTTTTATGC TGGTACAGGT GGGCTCCGGC
ACGCTGGTCG CCGGTTTCAA ACCGGTCATC GACAAGATTT CCGAGTACCA CCACCTCACC
GGTTCGGTCA TCGACCCCTA CACCACCATG ATGGCGACCA TGGAAACCAT GGGCGATAAA
TACGCCTGGG TCGGCTACGC GGTGCTGCTG GCGCTGGGCA TCAATATTTT GCTGGTGGCA
TTCCGCCGTT ACACCGGCAT CCGCACCATC ATGCTCACCG GCCATATCAT GTTCCAGCAG
GCCGGGCTGG TGGCGGTGTT CTATCTGGTG CTGGGCGCGT CGATGTGGGA AACCATCATC
TACTCGGCGG TGATCATGGC GCTTTACTGG GGCATCTCGT CGAACATCAT GTTCAAGGCC
ACCGAAGCCG TGACCGGCGG CGCCGGCTTC TCCATCGGCC ACCAACAGCA GGTCGCCTCC
TGGATCGCCA CCAAAGTCGC GCCGAAACTG GGCAACAAGG AAGACAGCGT CGACCACCTG
CAACTGCCGA AATGGCTGCA CATCTTCCAC GACAGTATTA CCGCGACCGC CATCGTCATG
ACCGTTTTCT TCGGCATCAT CCTGCTCTCT TTCGGGCTCG ATAACCTGCA GAAAATGGCC
GGGCAGACCC ACTGGACTAT CTACATTCTG GAAACCGGGC TGAAATTCGC CGTCGCTATT
CAAGTGATAG TGGCGGGGGT ACGCATGTTC GTCGCAGAAC TGTCCGAAGC GTTTAAAGGG
ATCTCCGAAC GGGTTATTCC CAACGCGGTG CTGGCTATCG ACTGCGCCGC CATCTACGCC
TACTCGCCGA ACGCCATGGT ATTCGGCTTC ATGTGGGGCA CCATCGGCCA GTTCATCGCG
GTGGTCGGGC TGCTGGTGTT CAACGCGCCG ATCATGATCA TCCCCGGCTT TATCCCGATG
TTCTTCTCCA ACGCCACCAT CGGCGTGTTC GCCAACCACT TCGGCGGCTG GAAAGCGGTG
ATGAAGATCT GCTTCGTGAT GGGCATCATC GAAGTGCTGG GCTCCGCCTG GGCGATCCAC
CTGTTCGCGC TGCACGGCGC CAAATTCAAC GCCTGGATGG GGATGGCCGA CTGGGCATTA
CTGTTCCCGC CTATCATGCA GGGGTTGTCC ACCTCCTCGC TGTTCTTCTT CGTGCTGCTG
GCGGGCGTCG GGGTCTATAT GTATTTCGCC TCCCGCCTCC TGCGCGCTGA AGAAGACGCC
GCCGCGCACG CCGCTCCGAC CGTCGCCGAC ATCCCGGAAA CCGCAACGCA CAACGACGAT
GCCGCAACGC AGCCGGGGCG CGCCATCCGC ATTCTGGCGG TGTGTGGCAA CGGTCAGGGC
TCTTCCATGA TGATGAAAAT GAAAATCGGC AAATACCTGG AGCAAAAGGG TGTGCCGCAC
ATCATGGATT CCTGCGCCGT CGCAGATTAC AAATCCAAGT TGGCCACCAC CGACATCATC
GTCTCCTCCC GCCATCTGGC CGGTGAAATG CAGCCGGGCG AGGGTAAGTT CGTACTCGGC
GTACAAAACA TGCTGAACCC GAACTCTTTC GGCGATGAAC TGCTCGGCTT GATCCAGAAA
AAACTGACCG CCGGCGATTT CTGA
|
|---|
| Protein sequence | METLYSIFYI FYSQVMTKAP LLLGLVTCIG YLLLRRDTTT VIKGTTKTIV GFMLVQVGSG
TLVAGFKPVI DKISEYHHLT GSVIDPYTTM MATMETMGDK YAWVGYAVLL ALGINILLVA
FRRYTGIRTI MLTGHIMFQQ AGLVAVFYLV LGASMWETII YSAVIMALYW GISSNIMFKA
TEAVTGGAGF SIGHQQQVAS WIATKVAPKL GNKEDSVDHL QLPKWLHIFH DSITATAIVM
TVFFGIILLS FGLDNLQKMA GQTHWTIYIL ETGLKFAVAI QVIVAGVRMF VAELSEAFKG
ISERVIPNAV LAIDCAAIYA YSPNAMVFGF MWGTIGQFIA VVGLLVFNAP IMIIPGFIPM
FFSNATIGVF ANHFGGWKAV MKICFVMGII EVLGSAWAIH LFALHGAKFN AWMGMADWAL
LFPPIMQGLS TSSLFFFVLL AGVGVYMYFA SRLLRAEEDA AAHAAPTVAD IPETATHNDD
AATQPGRAIR ILAVCGNGQG SSMMMKMKIG KYLEQKGVPH IMDSCAVADY KSKLATTDII
VSSRHLAGEM QPGEGKFVLG VQNMLNPNSF GDELLGLIQK KLTAGDF
|
|---|
| |