Gene Dd703_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0098 
Symbol 
ID8087519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp116341 
End bp117660 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content53% 
IMG OID644834164 
Producthistidine kinase 
Protein accessionYP_002985739 
Protein GI242237558 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC TCGATACCTC CTTTGAACCG CCTCATCTGC TATCCCTGAA CATCGCCGCA 
TTTGTCGGAT TACTGGGGTA CTTTTTGCTG TGGTTTTTCC CCGACCAGTC GGTGTATCTG
AAAATACTGA CGGTGTTCAT CATCGTGCTG TGTCTGATTT ACAGCAGTTT TACTTTTTCC
GAGCGGTTGA ATGCCAGGAT TCATGTCGTC TCCAACCTGT TGGAAGCGCT GGGGCAGGAG
AATTTCAGCC TGCGCGGCGT GACCAAAGGA AAAGGCGCGT TCGACAATCT GATCCGTCAA
ATCAACCAGT TATCCGGCAC GATGGCGCGT AGCCGTCAAC AACAGCAAGA AACCTACTAC
GTACTCCACA AGGTGATTTC CAATATCAGC GTCAGCGTGT TTGCCCTGGA TGCCGAGCAG
CGTGTGATGT GGTGTAACGA TGCCGCCTCC GCATTGCTGA ATAAACCCGT CAAATTGCTG
GTCGGCCAAC CGGCGGCGGA GTTCGGGCTG GAAGGGTTGT TGCAGCAGTC CTCCGGTGCA
GAGCCGATCG ATTGGCGCTT CCCCAGTGCA CAAGGGATGT TCCAGATACG GCATGATTCC
TATATGGAGG ATGGCCGGCA GAATCACCTA TTGTTTATCA GCGACGTCAG CAAACTGTTG
CGGAATGAAG AACAGAAAAC CTGGCAGAAC CTGTTGCGGG TGATCAGCCA TGAAATCAAC
AACTCACTGA CGCCGATCGC CTCCATCAGC CAGACGTTGT TGCAGGTATT CCGCAAAGAT
ACCCAGCATC CTGCGGCGCC GGATCTGGTG AACGGCATGG AAATCATCAA CAATCGCGCC
CGCGATTTAA TCGCCTTTGT CGGGAGCTAC CGTCAGCTCA ACCGGTTGCC GCCGCCCAGC
AAACAGCCTT GCGATGTCAC ACTATTGATG ACGCAAATGG CGATGTTGTT CCCGCAACGT
CGGTTGGTTT TTTCCGGCGA ATCGCCGTTG ATGGTTGCGG TGGACGCCAA CCAAATGCAG
CAGATGTTCA TCAATCTGAT GAAAAATGCG GATGAGGCCA TGGAGCCGGG CGTCGGCGAA
ATCGTACTGC GCTGGACAGT GGTGGCCCGG CAACTGCACA TTGAAATCAT TGATCAGGGT
AAGGGTGTGG CGAATATCGA AAACCTGTTT GTCCCGTTTT ATACCACCAA AAATCACGGC
AGCGGCATCG GGTTGATTTT GTGCCGACAG ATTGTCGAGG GACATGGCGG ACATCTGACA
CTGGAGAATC GCAAAGATGC GGAAGGATGC ATCGTCAATA TCTTCCTGCC GTTGGGATGA
 
Protein sequence
MSKLDTSFEP PHLLSLNIAA FVGLLGYFLL WFFPDQSVYL KILTVFIIVL CLIYSSFTFS 
ERLNARIHVV SNLLEALGQE NFSLRGVTKG KGAFDNLIRQ INQLSGTMAR SRQQQQETYY
VLHKVISNIS VSVFALDAEQ RVMWCNDAAS ALLNKPVKLL VGQPAAEFGL EGLLQQSSGA
EPIDWRFPSA QGMFQIRHDS YMEDGRQNHL LFISDVSKLL RNEEQKTWQN LLRVISHEIN
NSLTPIASIS QTLLQVFRKD TQHPAAPDLV NGMEIINNRA RDLIAFVGSY RQLNRLPPPS
KQPCDVTLLM TQMAMLFPQR RLVFSGESPL MVAVDANQMQ QMFINLMKNA DEAMEPGVGE
IVLRWTVVAR QLHIEIIDQG KGVANIENLF VPFYTTKNHG SGIGLILCRQ IVEGHGGHLT
LENRKDAEGC IVNIFLPLG