Gene Dd703_0095 details

Gene Information

• Locus tag: Dd703_0095
• ID: 8087516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 111476
• End bp: 112183
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644834161
• Product: ABC transporter related
• Protein accession: YP_002985736
• Protein GI: 242237555
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTGC TGGTTCAACT TGATAATGTG CATAAAATCT TCCTTACCGA TGAAATCGAG 
ACTCATGCCC TTAGCAAGAT AAATCTCTCC ATTCATTCGG GTGAGTACGT TTCCATTGCC 
GGCCCGTCCG GCTGCGGCAA GTCTACGCTA TTGTCGATTA TGGGATTGCT GGATACGCCT 
ACCGAAGGGC ACTACTGGTT GAATGGTACG GATATCGAAT TTATCAGCCG TAAGGAGATG 
GCGCGCCTGC GCAACAGAGA AATCGGTTTT ATCTTTCAGT CTTTCAACCT GATAAGCGAT 
CTGACCATTG AGGAAAATGT CGCATTGCCA TTGACTTACC GTAATGACAT CTCCCGTTCG 
GAGCAAAAAG CGCGGGTGAT TCAGGCGTTG GAGAAGGTCG GTATGTCCCA CCGTGTGCGG 
CATTATCCCT CCCAGCTTTC CGGTGGCCAA CAGCAGCGGG TGGCTGTGGC TCGCGCCATC 
GTTGGGCGGC CTTCGTTGCT GTTGGCCGAT GAGCCGACCG GCAATCTGGA TTCCGCCAAC 
GCTGAAGCGG TAATGAACAT TTTGGACGAA TTACATCAGG ACGGTGCAAC CATTTGTATT 
GTGACCCACG ATCCCCGATC TGCCATGCGC GCTCAGCGCA CCATTGTGCT GTCCGACGGG 
CAGGTGGTGG CTGATGGCGG GAACAGCCAA CTGCTGCAGG CGGTATAA 

 

Protein sequence

MTVLVQLDNV HKIFLTDEIE THALSKINLS IHSGEYVSIA GPSGCGKSTL LSIMGLLDTP 
TEGHYWLNGT DIEFISRKEM ARLRNREIGF IFQSFNLISD LTIEENVALP LTYRNDISRS 
EQKARVIQAL EKVGMSHRVR HYPSQLSGGQ QQRVAVARAI VGRPSLLLAD EPTGNLDSAN 
AEAVMNILDE LHQDGATICI VTHDPRSAMR AQRTIVLSDG QVVADGGNSQ LLQAV