Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0085 |
Symbol | |
ID | 8087506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 101327 |
End bp | 102442 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644834151 |
Product | high-affinity nickel-transporter |
Protein accession | YP_002985726 |
Protein GI | 242237545 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACTA TGACTGATTT CGTCTCTCTT TTGCAGCAGG GCGTAGCCAA TGCCTGGCTG TTTATTCCCA GCGCGGTGTT GCTGGGCGCA TTACACGGTT TGGAACCCGG TCATTCGAAG ACCATGATGG CCGCGTTTAT TATTGCCATT CAGGGGACGG TGCGGCAGGC GATCATGCTG GGGCTGGCGG CTACGCTGTC GCATACCGTC GTAGTCTGGT TGATCGCGCT GGGCGGCATG TATTTGAGCA ACGCCTTTAC TGCGGAAGCG ACGGAGCCCT GGTTACAACT GTGCTCTGGT TTCATCATTC TTGGCACGGC GGCCTGGATG TTTTGGCGAA CCTGGCAGGG GGAGCGGCAA TGGGATACGC ATCACCATGA GCACCACCAC CATGAGCACC ACCATGACGA GCAGCGTATC GTCGATACCG GCCACGGTCG GGTGATGCTG ACGATCATTG AAGAAACCGG TGAACCGCGC TGGCGACTGA CAGCGTTATC CGGTGCGCAG TGGGCGGCGG AACAGGTATA CGTAGAGACG GAACGGTCGG CAGGCGAACG ACAGCGCTTC TGTTTTGTCG AGCGCGAGGG GTATCTGGAG TCGGCGCAGA CCATCCCGGA GCCGCACAGT TTTCTGGCGT CTCTGACCCT GGGCCACGGC GACTATCACC ATGATTACCC ATTGGTCTTT TCCGACGACG GGCATGGACA ACCTGTGGGG CATAACGACG AATATCAAGA CGCCCATGAG CAGGCTCACG CCAGCGAAAT TCGCCGCCGG TTTGCCGATG GGCGGGCAAC CAATGGCCAG ATTTTATTAT TCGGGCTGAC CGGCGGGCTG CTGCCTTGCC CGGCGGCGAT CACCGTCTTG TTGTTGTGTC TTCAGGTGAA GGCGTTTTCG TTGGGAGCGG CGTTGGTGGT GTGCTTCAGC ATCGGGTTGG CGCTGACGCT GGTTGCCGTC GGCGTGGGAG CGGCGATCAG CGTGAAGCAG GTCAGCCGAC GCTGGTCGGG ATTTTCGACG CTGGCGCGTC GTGCGCCTTA TTTTTCCAGC CTGCTGATTG CTCTGGTCGG CGCCTATATG CTGGTTCACG GCGCTGGTCG ATTGAATTTC TTCTAA
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Protein sequence | MLTMTDFVSL LQQGVANAWL FIPSAVLLGA LHGLEPGHSK TMMAAFIIAI QGTVRQAIML GLAATLSHTV VVWLIALGGM YLSNAFTAEA TEPWLQLCSG FIILGTAAWM FWRTWQGERQ WDTHHHEHHH HEHHHDEQRI VDTGHGRVML TIIEETGEPR WRLTALSGAQ WAAEQVYVET ERSAGERQRF CFVEREGYLE SAQTIPEPHS FLASLTLGHG DYHHDYPLVF SDDGHGQPVG HNDEYQDAHE QAHASEIRRR FADGRATNGQ ILLFGLTGGL LPCPAAITVL LLCLQVKAFS LGAALVVCFS IGLALTLVAV GVGAAISVKQ VSRRWSGFST LARRAPYFSS LLIALVGAYM LVHGAGRLNF F
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