Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0078 |
Symbol | |
ID | 8087499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 93337 |
End bp | 94656 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644834144 |
Product | xylose isomerase |
Protein accession | YP_002985719 |
Protein GI | 242237538 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCTT ATTTCGATCA GATAGAAAAA ATCCGCTTTG AAGGTCAGGG CAGCAGCAAC CCATTAGCTT TCCGTCACTA TGATCCCGAA CAGGACATTC TCGGTAAACG GATGGCCGAC CACCTGCGCT TCGCGGTGTG TTACTGGCAT ACGTTCTGCT GGAACGGCGC GGATATGTTC GGCGCCGGCG CGTTTACCCG CCCCTGGCAA GGCAGCGGGG ATCCTCTGGC TCTGGCGCGC GCCAAGGCGG ACATCGCATT CGAGTTCTTT CAGAAGTTGG GGGTTCCCTA TTACTGCTTC CATGATGTGG ATGTATCGCC GGAAGGCGCG TCGTTACAGG AGTATCGCAG CAATTTCGCC GCCATGACCG ATATTCTCGC GGCTAAACAG CAGGATACCG GCGTCAAGCT GCTCTGGGGC ACCGCCAACT GCTTCACCCA TCCGCGTTAC GCCACCGGCG CCGCCACCAA TCCGGATCCG GAAGTGTTCG CCTGGGCGGC GACGCAAGTC TTCACCGCCA TGAACGCCAC CTTGCAGTTG GGAGGAGAAA ACTATGTGCT GTGGGGGGGA CGCGAAGGCT ATGAAACCCT GCTGAACACC GACCTACGTC AGGAAAGGGA ACAAATCGGC CGTTTCATGC AGATGGTGGT GGAACATAAA CACAAGATTG GCTTTCGCGG CACGCTGCTG ATCGAACCCA AACCGCAGGA GCCCACCAAG CACCAGTACG ATTATGACGT CGCCACCGTC TACGGTTTCC TGAAACAGTT CGGGCTGGAA AAAGACATCA AAGTCAATAT TGAGGCCAAT CACGCGACGC TGGCGGGCCA CTCCTTTCAC CATGAAATCG CCACCGCCAT CGCGCTCGGC ATTTTCGGTT CGGTGGACGC CAACCGCGGC GATCCGCAAC TCGGCTGGGA TACCGACCAG TTCCCTAACA GCGTGGAAGA AAACGCGCTG GTACTGTATG AAATCCTGCG GGCGGGCGGG TTCACCACCG GCGGGTTGAA CTTCGACGCC AAGGTGCGCC GCCAAAGCAC CGATCGTTAC GATCTGTTCC ACGCCCACAT CGGCGCGATG GACACGCTGG CGCTGGCGCT GAAAGTGGCG GCGCGCATGA TCGAGGATAA CGTGTTGAGC CGGCAGGTGG CGCAGCGTTA CTCCGGCTGG AACGGTGAAC TGGGCCAACA GATCCTGCAA GGTAATGCCT CGCTGGAAAC GCTGGCGCAC TATGCGGAAC GCCACCAGCT CGCTCCCCAG CACCGGAGCG GCCGCCAGGA AATGCTGGAG AATCTGGTCA ACCGCTATCT GTACGGCTGA
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Protein sequence | MHAYFDQIEK IRFEGQGSSN PLAFRHYDPE QDILGKRMAD HLRFAVCYWH TFCWNGADMF GAGAFTRPWQ GSGDPLALAR AKADIAFEFF QKLGVPYYCF HDVDVSPEGA SLQEYRSNFA AMTDILAAKQ QDTGVKLLWG TANCFTHPRY ATGAATNPDP EVFAWAATQV FTAMNATLQL GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKIGFRGTLL IEPKPQEPTK HQYDYDVATV YGFLKQFGLE KDIKVNIEAN HATLAGHSFH HEIATAIALG IFGSVDANRG DPQLGWDTDQ FPNSVEENAL VLYEILRAGG FTTGGLNFDA KVRRQSTDRY DLFHAHIGAM DTLALALKVA ARMIEDNVLS RQVAQRYSGW NGELGQQILQ GNASLETLAH YAERHQLAPQ HRSGRQEMLE NLVNRYLYG
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