| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0064 |
|---|
| Symbol | |
|---|
| ID | 8087485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 75338 |
|---|
| End bp | 76537 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834130 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_002985705 |
|---|
| Protein GI | 242237524 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.370021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGAAA TAGAAAATGA TGTTCCGGTT CTACGCCAGA TATCGGTTCG AGCCGTGATG
GAGTACCTGC TTCACGCCGG CCCGGCATCG CGTGCGGCGA TGGCAAAGGC AACGAAGCTG
TCCAAGCAGA CGATGTCCGA AGTTATTTTG ATTCTGGAAG AACGGGGGTG GGTACGCCCC
TGCGGACTGG AGTCGGGCAA GGTCGGGCGC GCCGCCATGA ACTACGAGAT CGCCGACGAT
CTGGCCTATG TGTTGGGCAT GGACGTCGGT GCCACCACGA TCCGGCTAAG CCTGGTCAAC
CTGCGCGGCG CCGAAATCAC GCATTACGAA ACAGAAAACA ACAGCCAGGG CGGCATCGAT
CTGGTCAATC GCTTGTGCCA GTTAAAAAAC GACATTCTGG CCCAGCAACA GATCGATGAG
AGCAAACTGC ACAGCGTCAG CGTGGCGATC CCCGGCGTGA TCAACCAGAA AACCGGCGCG
CTGGACATGG CGCCCAACCT GAAAAACATG AGCGGATTCG CGCTGCGGGA CACCATGCAG
CAGGCTTTCG GCTGCGAAGT GCTGATTGAA AACGACGTGA ATGCCGCCGC AATCGGCGAA
TACTGGCGGG GCTGCGGGCA GGACGACCAC TCACTGGCGT TTATTTCACT GGGTACCGGG
ATCGGTCTGG GCCTGATACT GGAAGGGATT CTACTGCGTG GCGCGATGGG CGCCGCCGGC
GAGATCTCCT ATCTGCCGCT GGGCGGAGAT GCCTACACGC CGGAAAGCCT GCGTCAGGGG
ACGCTGGAGT CGGTGCTGGG CGCCGCCGGT ATTAGCCAGC GCTATCATTT CGCCGGCGGA
GCGGCGAACA CGCCGGTGCG GGACATACTG AACCGCTACG CGGACAAAGA GCCTGCCGCC
ATCGTGACCA TCGAAGAGAC GGCCCGCACC GCAGCCTTGC TGGTGCTGTC GGTGTCACTG
ATGTTCGACC CGGAAAGCAT CATCATTGGC GGCAATATCG GTATCCGTCC GGAGCTGACC
GAACGCATTC GCTATTACCT GAGTAACTGT TCTCCCCACC CTATCCTGCT GAAATCCAGC
ACCCTGGGTT CGCAGTCCGT ACTGACGGGC GCAGTGGCTA TTTCATTGAA TAAATTACAC
AATCTTCTTT TTGGTTTACC GGATCTGTCC CGCAAGATCC CATTGCCTAA AAACCTCTGA
|
|---|
| Protein sequence | MIEIENDVPV LRQISVRAVM EYLLHAGPAS RAAMAKATKL SKQTMSEVIL ILEERGWVRP
CGLESGKVGR AAMNYEIADD LAYVLGMDVG ATTIRLSLVN LRGAEITHYE TENNSQGGID
LVNRLCQLKN DILAQQQIDE SKLHSVSVAI PGVINQKTGA LDMAPNLKNM SGFALRDTMQ
QAFGCEVLIE NDVNAAAIGE YWRGCGQDDH SLAFISLGTG IGLGLILEGI LLRGAMGAAG
EISYLPLGGD AYTPESLRQG TLESVLGAAG ISQRYHFAGG AANTPVRDIL NRYADKEPAA
IVTIEETART AALLVLSVSL MFDPESIIIG GNIGIRPELT ERIRYYLSNC SPHPILLKSS
TLGSQSVLTG AVAISLNKLH NLLFGLPDLS RKIPLPKNL
|
|---|
| |