Gene Dd703_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0029 
Symbol 
ID8087450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp36343 
End bp37197 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID644834095 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002985670 
Protein GI242237489 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGA TTCAACTGGA AAAAATGACT TTTCCGCTGC GCCGGAAAAC CCTGCGGCTG 
CGCCGCTACA TCGCCCAGCC GGGGCTGCTT CTCGCCTGGC TGGTGCTGCT CACCGTGATG
CTCTGGGCGC TGTTCCCCGC GCTGTTCACC CACGCCAACC CGGTTGAAGG CATTGCGGGC
GCGCAGCGGC TGGCGCCGGG TCAACATGCT CTGCTGGGCA CGGATCAGCT CGGCCGCGAC
GTTTACACCC GCATGGTTTA TGGCGCGTCG CACTCGCTGT CCGGCGCGGC GATCGCCGTC
GGGTTGGGTC TCGGCCTCGG CAGTCTGTTG GGCCTGCTGG CGGGCGCGCT CGGCGGACGT
TCGGATACGT TGGTCATGCG CGCCGTCGAT GTGCTGCTGG CGATCCCAAG CCTGCTGCTG
GCGCTGACGG TGATTATCCT GCTCGGCTTC GGCAACGTGA ACGCCTCCAT CGCCGTGGGC
ACCATTCTGG TGGCCAAATT CGCCCGGCTG GTGCGGGCGG AAGTGTTGCG CGTACGCAAC
AGCGACTACG TAGAAGCGGC GTTCGGCAGC GGCGGAACCT TTTGGAGCGT GCTTTGGCGG
CACATTCTGC CCAATGCGCT CCCCAATGTA CTGGCCTATG CCGCGCTGCA ATTCGGCTAC
GCCATTCTGG AGCTGGCCAC GCTGAGCTTC CTGGGCTACG GCGCGCCGCC GCCAACCCCG
GAATGGGGCC TGCTGATCGC CGAAGGACGC AACTACCTGG CGACCGCCTG GTGGCTGACG
ACGTTCCCCG GCCTGTTGGT GGTAGCGGTG GTGCTCGCCG CCAACCGCGT CAGTCAATCG
CTGCGGAGGG CATGA
 
Protein sequence
MATIQLEKMT FPLRRKTLRL RRYIAQPGLL LAWLVLLTVM LWALFPALFT HANPVEGIAG 
AQRLAPGQHA LLGTDQLGRD VYTRMVYGAS HSLSGAAIAV GLGLGLGSLL GLLAGALGGR
SDTLVMRAVD VLLAIPSLLL ALTVIILLGF GNVNASIAVG TILVAKFARL VRAEVLRVRN
SDYVEAAFGS GGTFWSVLWR HILPNALPNV LAYAALQFGY AILELATLSF LGYGAPPPTP
EWGLLIAEGR NYLATAWWLT TFPGLLVVAV VLAANRVSQS LRRA