| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7231 |
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| Symbol | |
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| ID | 8022937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012858 |
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| Strand | - |
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| Start bp | 655430 |
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| End bp | 658387 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644834063 |
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| Product | sarcosine oxidase, alpha subunit family |
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| Protein accession | YP_002985197 |
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| Protein GI | 241667113 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0118066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.098262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCT TCCGTCTTTC CTCCGGCGGC CGCATCGACC GCGCCACGAC GCTCGGTTTT
ACTTTCGACG GCAGGCCACT CGAAGGCCAT CCGGGCGATA CACTCGCCTC GGCGCTGCTT
GCCAACGGCG TCCAGCTCGT CGGCCGCAGC TTCAAATATC ACCGCCCGCG CGGCATCCTG
ACGGCGGGCG CTGCCGAACC GAACGCGCTG GTAACGACGG GCAGCGGCGG GCGCACCGAG
CCGAATACGC GCGCCACGAT GATCGAGCTC TACCAGGGGC TGACGGCAAA GAGCCAGAAC
CGCTGGCCTT CGCTCGGCTT CGATGTCGGC GCGGTCAACG GGCTGCTGTC GCCCTTCCTC
AGTGCCGGCT TCTACTACAA GACCTTCATG TGGCCGGCGG CCCTCTGGGA AAAGCTCTAC
GAGCCGGTGA TCCGCAAGGC GGCGGGCCTC GGCAGGGCTT CCTACGAGGC CGATCCCGAT
AGCTACGAGA AATGCTGGGC GCATTGCGAT CTGCTGGTGA TCGGTGCCGG CCCGACCGGT
CTTGCCGCAG CGCTGACCGC CGGCCGCGCC GGTGCGCGCG TCATCCTCGC CGACGAGGGG
TCCGAACTTG GCGGCAGCCT GCTTTCCGAC AGCGGCACTA TTGACGGCAA GCCGGCGGAT
GCGCTTCTCG GCGAGCTGCT TGCCGAACTG GCGAGCCTGG AGAACGTGCG CCGCCTGCCG
CGCATGACGG TGTTCGGCTG GTATGACGAC AATGTCTTTG GCGCCGTCGA ACGGGTGCAG
AAGCATGTGG CGATGCCGGA TCCGGAACGC CCCGTGGAAC GGTTGTGGCG CATCGTCGCC
CGCCAGGCGA TCCTTGCAAC CGGCGTCGAG GAGCGTCCGC TGGTCTTCGG CGGCAACGAT
ATTCCCGGTG TGATGATGGC AGGCGCGATG CGCAGCTATC TCAATCGGCA GGCGGTCGCG
CCCGGCAGAA GCACGGTCAT CTTCACCACC AACGATGCCG GATATCGAAC CGCAGCCGAT
CTGGAGGCCG CCGGCCTCAC CGTCGCGGCG ATCGTCGACA GCCGCGCGGA TGCGGCCGCG
AGCTGGCAGG GCCGCGCCGA AGTGCTGAAG GGCGCCAGGG TCATCGATGC GCTTGGCGGC
AAGCGCCTGC GCGGCGTCAG CGTCGAAACC GCAACCGGCA CCCGCCGGAT CGAAGCCGAT
GCGCTAGCCA TGTCGGGCGG CTGGAGCCCG ATCATTCATC TTGCCTGCCA TCGCGGTGCG
AAACCGCAAT GGTCGGACGA AGCCTCGGCG TTTCTGGCGC CTGTCCAGCA GGAAGGTCTG
ACCGTTGCCG GCTCGGCTGC CGGCCTTGCG CAAACCGCGA CCTGCCTCGG CGATGGCGCC
GCAAAGGCAG TTGCCGCGTT GAAGGCGATC GGTTTCGCGG CGGCGGAACC GGCCTTTGCC
TTGGCGTCCG AGGCGGCTGC ACAGGCAAAG CCGCTCTGGT CGGTCAAGGG CTCGAAGGGC
AAGGCCTTCG TCGATTACCA GAACGACGTG CATCTCAAGG ATCTCGGCCT CGCCGTCCGC
GAAGGCTACG GTCATGTCGA GCTTGCCAAG CGCTACACCA CATCAGGCAT GGCGACCGAT
CAGGGCAAGC TTTCCAACAT CAACGCCATC GGCATCCTTG CCGAGGCGCG CGGCGTGTCG
CCCGCCGATG TGGGAACGAC GACTTTCCGG CCCTTCTATA CGCCGGTTTC CTTCGGCGCC
TTGACTGGGG CGTCGCGCGG CAAACATTTC CAGCCGGCGC GCAAATCGCC GCTGCATGGC
TGGGCTAAGA AGAATGGCGC GATCTTCGTC GAAACCGGCC TCTGGTACCG GTCCGCCTGG
TTTCCGCGCG CCGGAGAGAC GACATGGCGT GAAAGCGTCG ACCGCGAGGT GCTGAACATC
CGGAAGAATG CCGGCCTCTG CGACGTCTCG ACCCTCGGCA AGATCGAAAT ATCAGGGAGG
GATGCCGCGA CCTTCCTCGA TCGCATCTAT TGCAACGGCT TCGCCAAGCT CGCTGTCGGC
AAGGCGCGTT ACGGCATCAT GCTGCGTGAG GACGGCTTCA TCTATGATGA CGGCACCACC
AGCCGGTTCA GTGACGAGCA TTTCTTCATG ACGACGACGA CCGCACTTGC CGCCGGCGTG
TTGACCCATC TCGAATTCTG CGCCCAGACG CTCTGGCCGG AACTCGACGT CTGCTTCGCC
TCCTCGACCG ATCAATGGGC GCAGATGGCC GTTGCCGGGC CGAAGTCGCG CGCCATTCTT
CAGGAGATCG TCGACGAGGA TTTGTCGGAT GCAGCCTTCC CCTTCATGAG CGCGCGCAAG
GTCTCCCTGT TCGGCGGCCA ACTTGAAGGG CGGCTCTTCC GGATTTCCTT CTCGGGCGAA
CTCGCCTACG AGCTGGCGGT GCCCGCCGGC TACGGCGAAG GCGTTGCGGA TGCGATCATG
GCGGCGGGCG AGAAACATGG CATCTGCGCC TATGGCGCCG AAGCGCTCGG CGTCATGCGC
ATCGAAAAGG GCCATGTCAC CCATGCCGAA ATCAACGGCA CGGTGACGCC TGGCGACCTC
GGTTTCGGCC GCATGGTTTC ATCAACCAAG CCGGATTTCA TCGGCAAGGC ATTGCTTGCC
CGCGAAGGGC TGCAAGATCC CGACCGGCAG CGCCTTGTCG GCGTCAAGCC GCTTAATCCG
GCGACCGGTT TCCGCACCGG CTCGCATATT CTCGCCGACG GCGTTGCGGC GACCCTCGAA
AACGACCAAG GCTACGTCAC TTCAAGCGCC TTTTCGCCAG GGCTCGGCCA TACGATCGGC
CTGGCGCTCG TCAGGCGTGG GCCGGAGCGC ATCGGTGAAA AGGTGACGGT CTGGAACGGC
CTGCGCAACG AATTCACCGA TGCGGTGCTC TGCCATCCCG TCTTCATCGA TCCCGAAAAC
GAGAAGCTCC ATGCGTGA
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| Protein sequence | MTSFRLSSGG RIDRATTLGF TFDGRPLEGH PGDTLASALL ANGVQLVGRS FKYHRPRGIL
TAGAAEPNAL VTTGSGGRTE PNTRATMIEL YQGLTAKSQN RWPSLGFDVG AVNGLLSPFL
SAGFYYKTFM WPAALWEKLY EPVIRKAAGL GRASYEADPD SYEKCWAHCD LLVIGAGPTG
LAAALTAGRA GARVILADEG SELGGSLLSD SGTIDGKPAD ALLGELLAEL ASLENVRRLP
RMTVFGWYDD NVFGAVERVQ KHVAMPDPER PVERLWRIVA RQAILATGVE ERPLVFGGND
IPGVMMAGAM RSYLNRQAVA PGRSTVIFTT NDAGYRTAAD LEAAGLTVAA IVDSRADAAA
SWQGRAEVLK GARVIDALGG KRLRGVSVET ATGTRRIEAD ALAMSGGWSP IIHLACHRGA
KPQWSDEASA FLAPVQQEGL TVAGSAAGLA QTATCLGDGA AKAVAALKAI GFAAAEPAFA
LASEAAAQAK PLWSVKGSKG KAFVDYQNDV HLKDLGLAVR EGYGHVELAK RYTTSGMATD
QGKLSNINAI GILAEARGVS PADVGTTTFR PFYTPVSFGA LTGASRGKHF QPARKSPLHG
WAKKNGAIFV ETGLWYRSAW FPRAGETTWR ESVDREVLNI RKNAGLCDVS TLGKIEISGR
DAATFLDRIY CNGFAKLAVG KARYGIMLRE DGFIYDDGTT SRFSDEHFFM TTTTALAAGV
LTHLEFCAQT LWPELDVCFA SSTDQWAQMA VAGPKSRAIL QEIVDEDLSD AAFPFMSARK
VSLFGGQLEG RLFRISFSGE LAYELAVPAG YGEGVADAIM AAGEKHGICA YGAEALGVMR
IEKGHVTHAE INGTVTPGDL GFGRMVSSTK PDFIGKALLA REGLQDPDRQ RLVGVKPLNP
ATGFRTGSHI LADGVAATLE NDQGYVTSSA FSPGLGHTIG LALVRRGPER IGEKVTVWNG
LRNEFTDAVL CHPVFIDPEN EKLHA
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