| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7230 |
|---|
| Symbol | |
|---|
| ID | 8022936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 654892 |
|---|
| End bp | 655437 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644834062 |
|---|
| Product | Sarcosine oxidase gamma subunit |
|---|
| Protein accession | YP_002985196 |
|---|
| Protein GI | 241667112 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
|---|
| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0171161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.102806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATC TTCCGCAACA CAAGCCGGTT CTGGCCGGGG CAGCATATAA AGGCATCTCA
GGGGCGGGCG TCCGGCTGGA AGCCTTGCCG GAGGGCCATC TCCTGCATGT GCTCGGCGCA
ATCGAGCCCA CCGCGCTCGC CGCAGAATTG GTGAAAGCAG GCTTTGCGAA AAGTTCGATC
CGTAAGGCAG GCTTCCGGCA ATGGTTCGTC GCCGGCCACG AGCCGCTCGT GCCCGCCAGC
CTCCATGCTC TCGCGGCAGC ACTTGCGGGA AAGGCTTTCG TCATGGACCA GAGCCACGGG
CGCGTGCGTA TCGGCGTTTC CGGCCGTTCT TCGCGCGCAC TTCTCTCAAG GGGGGCCGCC
GTCGATCTCG ATCCTTCCGT CTTTCCGGAA GGCCATTCGG CCATGACGAT GGTCGGTCAT
CTCTCCGTGC AGATCGTCCG CACCGGCGAT GACAGCTTCG AACTCACGGT CCTGCGCGGT
TTTGCCGAAA GCCTCTGGGA CGATCTCGTG CATATGGCGG CGAGCGCTGA AAAGGACGAC
GTCTGA
|
|---|
| Protein sequence | MRDLPQHKPV LAGAAYKGIS GAGVRLEALP EGHLLHVLGA IEPTALAAEL VKAGFAKSSI
RKAGFRQWFV AGHEPLVPAS LHALAAALAG KAFVMDQSHG RVRIGVSGRS SRALLSRGAA
VDLDPSVFPE GHSAMTMVGH LSVQIVRTGD DSFELTVLRG FAESLWDDLV HMAASAEKDD
V
|
|---|
| |