Gene Rleg_7195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_7195 
Symbol 
ID8022901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp616655 
End bp617917 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content65% 
IMG OID644834028 
Productprotein of unknown function DUF181 
Protein accessionYP_002985162 
Protein GI241667078 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.175202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.168527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT TCACCGACCT TGAAACGCTT GCCGGTGACC TTAAACGATC ATCGGCCGGT 
GTCAGCGACT ACCATGACCG CGCCGTCACG CCGGCGCAGA CCTTGGCGGC CATCAGGCCG
CATCTGCGCG AATTCGGCAT TACGCGCGTC GGCCTCCTGA CTGCACTCGA CGTTTTGAAC
ATCCCCGTCG CCTTCGCAAC GAGGCCGAAC AGCCATACGC TCTCGGTCTT TCAGGGCAAG
GGTATCGACA ACGATGCCGC CATGGCCTCG GCGGCGATGG AGGCGGTCGA GACGCGGATC
GCCGAAATTG CCCCCAACGA CATGACGCAG GCAACGATCG AGAACATGCG GGCGGAGCAT
GCCGCGATGA TCGATCTCGA CAATGTCGCA CGCTGCGCAC CCGACGAAAT CGGACGAGCT
CCCATCCCCT GGTGCTCCGG GCTCGACATT CTTTCCGGCA GCAGCGTCTT CGTGCCCTGG
TGGCTCGTCG GTCTCGACCA TCGCGGCGAG AGGCCGCCCG GCTTCGAGCA GTCGAGCGAT
GGGCTCGCCT CCGGCAACAC CCCGTCCGAA GCGGTCCTGC ATGGGCTTTG CGAGCTGGTG
GAGCGCGACG CCTGGGCCCT GACCCAGCTG AAGTCGCCCG AGCGCCTGAA GGAGAGCCGC
ATCAACCCCG CCTCCTTCGG CGATGCGGTC ATAGATGTCA TGACCGACCG GATCACCCGT
GCCGGCATGA AACTGCTGCT GCTCGACATG ACGACGGATA TCGGCGTTCC CGCTTTTCTG
GCCGTCATCA TGCCAGGCAA CATTTCAGAC CGTGTCGACG CGCGCTGGTC GCATGTCTGC
GGTGGCTGCG GCTGCCACCC CGATCCGGTG CGCGCCGCGC TGCGCGCCAT TACCGAAGCG
GCGCAGAGCC GGCTCACCGC GATTGCCGGC AGCCGCGACG ATTTCTCGCC GCGCATCTAT
CAGCGGCTCG ACAGGAGTGC GGCGATGCAG CAGGTAGTCG AACTGTGCGA GGGCGACGGC
CGGATGCGCT CGTTCCACGC CCGCGATCGC CGCCCGGCGA CGATCCAGGA CACCATCGGC
CATATTGCCG ACCGGCTGGC GGCAACCGGC ATCGAGCAGA TCGTCGTCGT GCCGTTTCCG
CACCCGGCCC TGCCGATCTC CGTCGTCAGG GTGATCGTGC CGGGACTGGA GGTCGATATC
TCAGGCCAAT ATATCCAGCT CGGCCTGCGC GCCGTCAACA CCATGAGAGG AGCCGAATCA
TGA
 
Protein sequence
MSAFTDLETL AGDLKRSSAG VSDYHDRAVT PAQTLAAIRP HLREFGITRV GLLTALDVLN 
IPVAFATRPN SHTLSVFQGK GIDNDAAMAS AAMEAVETRI AEIAPNDMTQ ATIENMRAEH
AAMIDLDNVA RCAPDEIGRA PIPWCSGLDI LSGSSVFVPW WLVGLDHRGE RPPGFEQSSD
GLASGNTPSE AVLHGLCELV ERDAWALTQL KSPERLKESR INPASFGDAV IDVMTDRITR
AGMKLLLLDM TTDIGVPAFL AVIMPGNISD RVDARWSHVC GGCGCHPDPV RAALRAITEA
AQSRLTAIAG SRDDFSPRIY QRLDRSAAMQ QVVELCEGDG RMRSFHARDR RPATIQDTIG
HIADRLAATG IEQIVVVPFP HPALPISVVR VIVPGLEVDI SGQYIQLGLR AVNTMRGAES