Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_7159 |
Symbol | |
ID | 8022526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 584589 |
End bp | 585128 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833995 |
Product | RNA polymerase sigma factor |
Protein accession | YP_002985129 |
Protein GI | 241667045 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.693773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCA AAGACCGCCC CTTCGACGTC ATCGGACAGC TTGCAGCGCT GAGGCGCTAC GCTCGCTCGC TGGTGCGCAA TTCGGACGAG GCGGAGGATC TGGTGCATGA TGCGCTGGTG CGCGCCTTCG AGAAGCGAAA GAGCTTCCGC AGCGGCGGCA ACCTGCGCAC CTGGCTGCTC TCGATTCTGC ACAATGCTCA TATCGATCGT CTTCGCCGGA ACCGGTCGCT GACGCGACGC CACGATGAAG CAGCTGTCGA AGCCGAGCAG TCCCTTCCAG CCGGCCAGGA ACATGCCGTG CGCCTGCAGC AGGTGCGCGA CGCCTTCTTC GACCTGCCGG AGGAACAGCG TGAGGCGTTG CATCTCGTCG CGATCGAAGA TCTTTCCTAC CAGGAAGCCG CCCAGGCGCT TGGCATTCCT GTGGGGACGC TGATGTCGCG CATCTCCCGC GCGCGGGCTC AACTGCGCGA ATTCGAGGAG AAGACGCCGC GGGTTTCGCA TCTGAGAATC ATCGGAGGGA ACGGCAATGA AAGCAATTGA
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Protein sequence | MERKDRPFDV IGQLAALRRY ARSLVRNSDE AEDLVHDALV RAFEKRKSFR SGGNLRTWLL SILHNAHIDR LRRNRSLTRR HDEAAVEAEQ SLPAGQEHAV RLQQVRDAFF DLPEEQREAL HLVAIEDLSY QEAAQALGIP VGTLMSRISR ARAQLREFEE KTPRVSHLRI IGGNGNESN
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