Gene Rleg_7159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_7159 
Symbol 
ID8022526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp584589 
End bp585128 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID644833995 
ProductRNA polymerase sigma factor 
Protein accessionYP_002985129 
Protein GI241667045 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.693773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA AAGACCGCCC CTTCGACGTC ATCGGACAGC TTGCAGCGCT GAGGCGCTAC 
GCTCGCTCGC TGGTGCGCAA TTCGGACGAG GCGGAGGATC TGGTGCATGA TGCGCTGGTG
CGCGCCTTCG AGAAGCGAAA GAGCTTCCGC AGCGGCGGCA ACCTGCGCAC CTGGCTGCTC
TCGATTCTGC ACAATGCTCA TATCGATCGT CTTCGCCGGA ACCGGTCGCT GACGCGACGC
CACGATGAAG CAGCTGTCGA AGCCGAGCAG TCCCTTCCAG CCGGCCAGGA ACATGCCGTG
CGCCTGCAGC AGGTGCGCGA CGCCTTCTTC GACCTGCCGG AGGAACAGCG TGAGGCGTTG
CATCTCGTCG CGATCGAAGA TCTTTCCTAC CAGGAAGCCG CCCAGGCGCT TGGCATTCCT
GTGGGGACGC TGATGTCGCG CATCTCCCGC GCGCGGGCTC AACTGCGCGA ATTCGAGGAG
AAGACGCCGC GGGTTTCGCA TCTGAGAATC ATCGGAGGGA ACGGCAATGA AAGCAATTGA
 
Protein sequence
MERKDRPFDV IGQLAALRRY ARSLVRNSDE AEDLVHDALV RAFEKRKSFR SGGNLRTWLL 
SILHNAHIDR LRRNRSLTRR HDEAAVEAEQ SLPAGQEHAV RLQQVRDAFF DLPEEQREAL
HLVAIEDLSY QEAAQALGIP VGTLMSRISR ARAQLREFEE KTPRVSHLRI IGGNGNESN