Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_7144 |
Symbol | |
ID | 8022511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 561062 |
End bp | 562960 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644833980 |
Product | ABC transporter related |
Protein accession | YP_002985114 |
Protein GI | 241667030 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG AACTGGAAAC CGAGCGTCCC GACGTTCGCG AGGATGGACG CCGCCCGCCG CGGGCGGTGG TCGGTTCGCA TCGCGTCGAG GAGGAGATGT TCGGCAAGGC CTTCGACGGC AATATCGTCA AACGCATCTG GGGTTTCGTT CACCCCTATC GCCGCCAGGT CGTGTGGTCG GTCGTTGCTG TTTTGACCTT CACGATGATG CAGCTCACCA TCCCGCTGAT CATCCGCTAT GCCATCGACC ACGGCATGTC CCCGGGCGGC AACCACTCGG CGCTGGCCTG GTCGATCGTC GCCTTTTCCA TCGCCATCCT CATCAATTAT GCAGCGAGCT ACGCGCAGGA GACGCTGGTC GGCGGCGTGG CGGAGGACGT GCTCTTCGAT ATCCGCAAGG CGATGTTTTC GCATCTTCAG CACGTCTCGC TCTCCTTCAT GGACAAGACC GAAGTGGGCC GGCTGATGTC GCGGCTGCAG GGCGACGTCA ACTCGATGCA GGAATTCCTC GAAACCTCGG TGCTGTCGGT CGGAGACATC GTGCTGCTCT TCGGCATCGT CTTCGTCATG CTCTATCTCG ATTTCAAATT GGGGCTGCTG ACGCTCTCGG TGCTGCCGGT ACTGTTCATC GTCCGGCTGT TCTGGCTGCC GCTGGCGCGC AAATCCTTCA TGGCCGCGCA CGAGACCAAT TCGATTGCCG CCGGCGCCCT CGCCGAAGCG ATCCACGGTG TGCGTGCGGT CCAAAGCATG GACAGGCAGG GCGTCAACTT CACGCTTTAC GACGACAAGG CGCATGCCAA CTTGCAGACG CATCTGACGG CGGCGCGCTA TGCGCAGGTG ATGGTGCCGA TCGTCGACAG CCTGACCGGC GTGGCGATGG CGCTCGTCAT CGTCGTCGGC GGCGCCCGCG TCCTCAATCA GGCGCTCGAT GTCGGCGTGC TCGTCGCCTT CCTGTTCTAC ATCCAGCGCT TCTTCGACCC GATCCGCTCG CTGACCCTGC AATATTCAGT GATGCAGCGC GCCATGGCGT CTGGCCAGCG GCTGACCGAA GTGCTCGACG TGCCTGTCGA CATCAAGGAC GCGCCCGATG CCAAGGCCTT GTCGCGCGAC ATGGACGGCT CGGTGGAATT CAAGGACGTC GTCTTCGGCT ACAATCCGAA ACATCCGGTG CTGAAGCATG TCAGCTTCAA GGTCAATCCC GGCGAGACGG TGGCGCTGGT CGGCCCGACA GGGTCCGGCA AGTCGAGCTG CATGTCGCTG ATCCATCGCT TTTACGACGT GCAGCAGGGC CAGGTGCTGG TCGGCGGCGA CGATGTGCGT CATCTGACGC AGGATTCGCT CGGAGCGCAG ATCGCCATGG TGCTGCAGGA ACCCTTCCTC TTCACCGGCA CCGTTTTCGA AAACATCCGC TACCACAAGC TGGAGGCGAC GCGCGAGCAG GTGATCGAGG CGGCAAGGGC CGTCGGCGCG CATGACTTCG TGATGCGCCT GCCCGATGGT TACGACAGCG TTCTCGGCGA GCGCGGCGGC AACCTTTCGC TCGGCCAGCG CCAGCTGTTG AGCTTTGCCC GCGCATTGGT GGCGGACGCA AAGATCCTCG TGCTCGACGA GGCGACGGCC AATATCGACA GCTATACCGA AATGCTGATC CAGAAGGCGC TGGTGAAGCT GCTCGAAAAC CGCACCGGCC TCGTCATCGC CCATCGGCTT GCGACGATCC GCGAGGCGGA CCGCATCATC GTGCTGCAGA ACGGCGAAGT CATCGAAAGC GGCAACCACC GCCAGCTGAT GAAGAACGGC AAACTCTATT CCAAGCTCTA CAATCTGAAC TACTCCTCCT TCGACGACAT TCCCGAAGAC GTGCTGGAAG AGACGACGGC AGCGGAATCG GCGACCTAG
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Protein sequence | MAEELETERP DVREDGRRPP RAVVGSHRVE EEMFGKAFDG NIVKRIWGFV HPYRRQVVWS VVAVLTFTMM QLTIPLIIRY AIDHGMSPGG NHSALAWSIV AFSIAILINY AASYAQETLV GGVAEDVLFD IRKAMFSHLQ HVSLSFMDKT EVGRLMSRLQ GDVNSMQEFL ETSVLSVGDI VLLFGIVFVM LYLDFKLGLL TLSVLPVLFI VRLFWLPLAR KSFMAAHETN SIAAGALAEA IHGVRAVQSM DRQGVNFTLY DDKAHANLQT HLTAARYAQV MVPIVDSLTG VAMALVIVVG GARVLNQALD VGVLVAFLFY IQRFFDPIRS LTLQYSVMQR AMASGQRLTE VLDVPVDIKD APDAKALSRD MDGSVEFKDV VFGYNPKHPV LKHVSFKVNP GETVALVGPT GSGKSSCMSL IHRFYDVQQG QVLVGGDDVR HLTQDSLGAQ IAMVLQEPFL FTGTVFENIR YHKLEATREQ VIEAARAVGA HDFVMRLPDG YDSVLGERGG NLSLGQRQLL SFARALVADA KILVLDEATA NIDSYTEMLI QKALVKLLEN RTGLVIAHRL ATIREADRII VLQNGEVIES GNHRQLMKNG KLYSKLYNLN YSSFDDIPED VLEETTAAES AT
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