Gene Rleg_7126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_7126 
Symbol 
ID8022493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp538519 
End bp539691 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID644833962 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002985096 
Protein GI241667012 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.106736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCC TTCCCGCACC CGGCGCGCCG CTTCCGCACT ACGTCTCGAC CGCTCCTTTC 
GATCCGCTTG CGACCGAATC GATGACGTCG GCGCAATCGC GCATCCATCT CGCCTCGCAA
AAGCAGCTGA TGTGGTGGAA ATTCAAGCAG CACAAGCTCG CCTTGATCTC CGGCATCTTT
CTCGCCGCCG TCTACCTGAT GATCCTGATC GTCGAGTTCC TGGCGCCCTA CGGCCTGCAC
ACGCGCAATG TCGATTTCAT CCACGCGCCG CCGCAGGCCG TCCATTTCTT CGACAAGGGC
AGCTTCGTCG GTCCCTTCGT CTACGGCCGC GGCATGACGC TCGATCTCGA CACGCTGCAC
CGTGTCTATA CCGACCGGCC GAACGACGTG CAGCCGATCC GTTTCTTCTG CCGCGGCGAT
GCCTATAAAT TCTGGGGCGT TGTGGCCTCG AACTATCATC TCGTCTGCCC GGCGATCGGC
GGCCAGATGT TCCTGCTCGG CACCGACCGG CTCGGCCGTG ACGTGCTCTC ACGCATCCTC
TACGGCGCGC GCATATCGTT GACGATCGGC CTGATCGGCA TTTCGATCAG CTTCGTGCTC
GGTATCGTCA TCGGCGGCCT TGCCGGTTAT CGCGGCGGCA TTTTCGATCT CATCGTCCAG
CGCCTGATCG AAGTGCTGCA ATCGCTGCCG AGCCTGCCGC TGTGGATGGC GCTGGCTGCC
ATCATGCCGG TGACCTGGAG CCCGATCGTC ATCTATTTCG GCATCACCGT CATCCTCGGC
ATCATCGACT GGACGGGGCT CGCGCGTGCC GTGCGCTCCA AACTCCTGGC GCTGCGCGAG
GAGGATTATG TCCAGGCCGC ACAGCTGATG GGCGCCAGCA CGCCGCGCAT CATCGGCCGG
CATCTGGTGC CGGGCTTCAT GTCGCATCTC ATTGCTTCGG CGACGATTTC AATCCCCGGC
ATGATCCTTG GGGAGACCGC GCTCTCCTTC CTCGGCCTCG GCCTTCGTCC GCCGATCACC
AGCTGGGGCA TTCTGCTGAC CGAGGCAAAA AGCGTCAGCG TCATCGCCTT CTATCCCTGG
CTGCTCTATC CGATCATTCC TGTTGTTCTT GTCATTTTGG CGTTCAACTT TCTGGGAGAC
GGCTTGCGTG ACGCGGCAGA TCCCTACAAA TAG
 
Protein sequence
MSPLPAPGAP LPHYVSTAPF DPLATESMTS AQSRIHLASQ KQLMWWKFKQ HKLALISGIF 
LAAVYLMILI VEFLAPYGLH TRNVDFIHAP PQAVHFFDKG SFVGPFVYGR GMTLDLDTLH
RVYTDRPNDV QPIRFFCRGD AYKFWGVVAS NYHLVCPAIG GQMFLLGTDR LGRDVLSRIL
YGARISLTIG LIGISISFVL GIVIGGLAGY RGGIFDLIVQ RLIEVLQSLP SLPLWMALAA
IMPVTWSPIV IYFGITVILG IIDWTGLARA VRSKLLALRE EDYVQAAQLM GASTPRIIGR
HLVPGFMSHL IASATISIPG MILGETALSF LGLGLRPPIT SWGILLTEAK SVSVIAFYPW
LLYPIIPVVL VILAFNFLGD GLRDAADPYK