Gene Rleg_7116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_7116 
Symbol 
ID8022483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp527141 
End bp527719 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content59% 
IMG OID644833953 
Productisochorismatase hydrolase 
Protein accessionYP_002985087 
Protein GI241667003 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.902933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0479285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA GCCACTGGAT TCACTTGTGC ATCGATATGC AGCGGATGTT CGCGGAAAAC 
ACGCCCTGGC ATGTGCCGTG GATGAAGGAG GTCTCGCCTC GGATCCAGGA AATTTCGCAG
CGCTATCCGC AGCGCACGGT GTTCACGCGC TTCGTGCCGC CCAAGCGGGC AGAGGACATG
CATGGCATGT GGCGGAGCTA CTACCAGAAA TGGGACACCA TGACCCTCGA ACGACTGGGA
CCAGACATGG TCGATCTCGT CCCGTCACTC AAGGCGTTGG TTCCACCCGC CCGGATCTTC
GACAAGATGA CCTATTCTCC GTGGACCACC GGCGAGCTTC ACCGCGTCCT GGCAGGGGAA
GGGGTTCAGA CCCTCGCGAT CTCGGGCGGG GAGACGGACG TATGTGTGCT GGCCGCAGCC
CTTGGAGCTA TTGACCTTGG CTATCGTGTC ATCCTTCTGA AGGACGCCGT TTGTAGCGGT
GCCGATGATA CTCATGACGC CTCGCTCGAA TTGTTGGGGG ATAGGTTCTC GGTGCAGTTG
GAAATCTCGT CGACGGAGGA CGTTCTCCGC CAGTTATGA
 
Protein sequence
MNDSHWIHLC IDMQRMFAEN TPWHVPWMKE VSPRIQEISQ RYPQRTVFTR FVPPKRAEDM 
HGMWRSYYQK WDTMTLERLG PDMVDLVPSL KALVPPARIF DKMTYSPWTT GELHRVLAGE
GVQTLAISGG ETDVCVLAAA LGAIDLGYRV ILLKDAVCSG ADDTHDASLE LLGDRFSVQL
EISSTEDVLR QL