| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7076 |
|---|
| Symbol | |
|---|
| ID | 8022822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 489842 |
|---|
| End bp | 490759 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644833914 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002985048 |
|---|
| Protein GI | 241666964 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.62251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACA GCCGGGTCAA GTTCCGCCAT CTGCAAACCT TTGTCGAGGT GGCGCGGCAG
AAGAGCGTCA TGAAGGCCGC CGAATTGCTC CATGTCAGCC AGCCGGCGGT CACCAAGACG
ATCCGCGAAC TGGAACAGGT CCTGGGTGTC GATGTCTTCG AGCGCGACGG CCGCGGCATC
AAGATCACCC GCTACGGCGA GGTCTTCCTG CGCCACGCTG GCGCGGCACT GACGGCGCTG
CGTCAGGGTC TCGATTCCGT CTCGCAGGAG CAGTTTTCCG ATGCGCCGCC GATCCGGATC
GGCGCCCTAC CGACGGTGTC ATCGCGCATC ATGCCGCGGG CGATGGACCT CTTCCTCAAG
GAAAAGACCT GGAGCCGGGT GAAGATCGTC ACCGGCGAGA ACGCGGTGCT CCTGGAGCAG
CTTCGCGTCG GTGATCTCGA CCTCGTCGTC GGACGTCTGG CCGGGGCCGA GAAGATGGCG
GGCTTTTCCT TCGAGCATCT TTATTCCGAG CAGGTAGTGT TTGCCGTGCG CGCCGGCCAT
CCGCTGCTCG ACGGCCGGCA ATCGCCGTTT GCCAGCTTCG GCAACTATGC GGTGCTGATG
CCGACGCGCG GTTCGATCAT CCGGCCGGTG GTCGAAAATT TCCTCATCGC CAACGGCGTT
TCCAGCCTGC CGAACCAGAT CGAGACGGTG TCGGATTCCT TCGGCCGCGC ATTCCTCAGG
GCAAGTAACG CGATCTGGAT CATTTCCAAC GGCGTCGTGG CCGGCGATGT CGCCGACGGG
CGGCTGGCGC TTCTGCCGAT CGATACCGGC GAGACCAAGG GGCCGGTCGG CTTGACGATG
CGCGCCGATG CCGTGCCGTC CCTGCCGCAA TCGATCCTGA TGCAGACGAT CCGCGAGGCG
GCAGGCGAGG TTGCCTGA
|
|---|
| Protein sequence | MIDSRVKFRH LQTFVEVARQ KSVMKAAELL HVSQPAVTKT IRELEQVLGV DVFERDGRGI
KITRYGEVFL RHAGAALTAL RQGLDSVSQE QFSDAPPIRI GALPTVSSRI MPRAMDLFLK
EKTWSRVKIV TGENAVLLEQ LRVGDLDLVV GRLAGAEKMA GFSFEHLYSE QVVFAVRAGH
PLLDGRQSPF ASFGNYAVLM PTRGSIIRPV VENFLIANGV SSLPNQIETV SDSFGRAFLR
ASNAIWIISN GVVAGDVADG RLALLPIDTG ETKGPVGLTM RADAVPSLPQ SILMQTIREA
AGEVA
|
|---|
| |