| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6960 |
|---|
| Symbol | |
|---|
| ID | 8022988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 406046 |
|---|
| End bp | 407488 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644833817 |
|---|
| Product | protein of unknown function DUF1254 |
|---|
| Protein accession | YP_002984951 |
|---|
| Protein GI | 241666867 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACGA AACGCGATCT GCTCCGCTCC GCTGCGATGG CCGCACTCGT TGCCGCAACG
GCCAAGTCTA CCCCGGTGCT TGCGCAGAAC AAAGAAGAAT GGCCCAGCCT GCTGGAGGCG
AAGGATATCG CCGAGGAAGG CTTCATCTAC GGCCTGCCGC TCGTGATGAA CTATGCGGTC
ATGAACGAGT TCGCCGTGGA CAGGAACTCC GGACAGTTCA AGGCGCCGTT TAACGACATC
AACAACATGC ATCAGGTCGC CAGCCCGGCG GACACGGCAA TCATCACGCC GAACAGTGAC
ACGCCCTACT CGATCCTCTG GCTGGACTTG CGTGCTGAAC CGATGGTGAT CTCGGTGCCG
ACGGTCGAAA AGGAACGCTA CTACTCGGTC CAGCTTATCG ACGGCAACAC CTACAATTTC
GGTTATATTG GCTCGCGCAC CACGGGAACC GAGCCGGGTT CCTATCTCGT CGTCGGACCC
GACTGGAAAG GCGCGAAGCC CGACGGCGTC AAGCAGGTCT TCACCTCGAG CACCCCGTTC
GTATTCGCCA ACTTCCGGAC ACAGCTTATC GACGCCGACG ATATGGCGAA TGTGGAAAAG
GTGCAGACCG GCTATAAGGC GCAACCGCTT TCGGCCTTCC TCAAGCAACC CGCCCCGCCC
GCCGCACCGA CGATCGAGTT CCTTCCCGCC ACCACCGCCG GCATCAAGAA AAACTTCTTC
GAATATCTCG ACGTGGCTCT GCAATTCGTC CCGGAGACGT CAAGGGACAA GGTCATCCGT
GCGAAGCTTG CAAGGATCGG CATCGGGCCC GGAAAGACCC TCGAATTCAA GGATCTGCCG
CTCGAGCATA AGGCCGAGTT GTTGGTCGGC ATGAAGCAGG GTGACGACAA GATCGACAAG
TGGCTGGCCA GCGGAAACAA GCCCATCAAC GGCTGGAACG TCAGCTCGCT GCTTGGTGAC
GAGGCCTTCT ACAACGGCGA TTGGTTGCTG CGCTCAGGCG CTGCCAAGGC AGGCCTCTAT
GGCAACGATG CAGCAGAGGC CATGTACCCC TTCACCCGAA CAGATGCGAG CGGAAAGCCG
CTCGACGGCA GCAAGCACAA GTACACGATT ACCTTCCCGC CGGGCCAGTT GCCGCCAGTG
CATTCGTTCT GGTCAGTGAC CATGTACGAC GGCAAGAGCC AGTTGCTGGT CAAGAACCCG
ATCAATCGCT ACCTCGTCAA CTCTCCGATG TTGCCGGGAA TGAAGAAGGA TGCGGACGGT
TCGCTGACGC TGCACATCCA GAAGGACAGC CCCGGAGCGG ACAAGGAAGC CAATTGGCTT
CCGGCCCCGG ACGGCACGAT CTATCTCGTG ATGCGCCTGT ACTGGCCAAA GACGGAGGCG
CCTTCGATCC TGCCTGCGGG GAAAGGTACG TGGCAGCCGC CCGGCGTGAA GCGGGTCTCG
TAG
|
|---|
| Protein sequence | MLTKRDLLRS AAMAALVAAT AKSTPVLAQN KEEWPSLLEA KDIAEEGFIY GLPLVMNYAV
MNEFAVDRNS GQFKAPFNDI NNMHQVASPA DTAIITPNSD TPYSILWLDL RAEPMVISVP
TVEKERYYSV QLIDGNTYNF GYIGSRTTGT EPGSYLVVGP DWKGAKPDGV KQVFTSSTPF
VFANFRTQLI DADDMANVEK VQTGYKAQPL SAFLKQPAPP AAPTIEFLPA TTAGIKKNFF
EYLDVALQFV PETSRDKVIR AKLARIGIGP GKTLEFKDLP LEHKAELLVG MKQGDDKIDK
WLASGNKPIN GWNVSSLLGD EAFYNGDWLL RSGAAKAGLY GNDAAEAMYP FTRTDASGKP
LDGSKHKYTI TFPPGQLPPV HSFWSVTMYD GKSQLLVKNP INRYLVNSPM LPGMKKDADG
SLTLHIQKDS PGADKEANWL PAPDGTIYLV MRLYWPKTEA PSILPAGKGT WQPPGVKRVS
|
|---|
| |