| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6925 |
|---|
| Symbol | |
|---|
| ID | 8022953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 377892 |
|---|
| End bp | 379565 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644833786 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_002984920 |
|---|
| Protein GI | 241666836 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.102745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC CACGCCACAA TATCCGCGAA ATCCGCGCGC CCCGCGGCAA CGATCTCAAT
GCCAAAAGCT GGATGACCGA AGCGCCGCTA CGCATGCTGA TGAACAATCT CGACCCCGAC
GTCGCGGAAA ATCCGAACGA GCTCGTCGTC TATGGCGGCA TCGGGCGCGC CGCCCGCACC
TGGGAGGATT TCGACCGCAT CGTCGCGACG CTGAAGACGC TGACGGAAGA AGAAACGCTG
GTCGTGCAAT CCGGCAAGCC GGTCGGCGTG TTCCGCACCC ACAAGGATGC GCCGCGGGTG
CTGATCGCCA ATTCCAACCT CGTGCCGCAT TGGGCGACCT GGGACCATTT CAACGAGTTG
GATAAGAAGG GCCTTGCCAT GTACGGCCAG ATGACGGCCG GCTCGTGGAT CTATATCGGC
ACCCAGGGCA TCGTGCAGGG CACCTACGAG ACCTTCGTCG AGGCCGGCCG CCAACACTAC
GGCGGCAATC TCAAGGGCAA ATGGATCCTG ACCGGCGGTC TCGGCGGCAT GGGCGGCGCC
CAGCCGCTCG CCGCCGTCAT GGCCGGCGCC TGCTGCCTTG CCGTCGAATG CAATCCCGAT
TCGATCGATT TTCGCCTGCG CACCCGCTAT GTCGACGCCA AGGCCGAGAC GCTCGATGAA
GCGCTCGAGA TGATCGACCG CTGGACCAAG GCCGGCGAGG CGAAATCCGT CGGTCTGCTC
GGCAACGCCG CCGAAATCCT GCCGGAGATG GTCCGCCGCG GCATCCGCCC CGATATCGTC
ACCGACCAGA CCTCGGCGCA CGACCCGATC AACGGCTACC TGCCGAAGGG CTGGACGATG
GGCGAATGGA AGGCAAAGCG CGAAACCGAT CCGAAGGCCG TGGAAAAAGC GGCGCGCGCC
TCGATGCGCG AGCATGTCGA AGCGATGATC GCCTTCTGGA ACGCCGGCGT GCCGACCCTC
GATTATGGCA ACAATATCCG CCAGGTCGCC AAGGATGAAG GCCTCGAAAA CGCCTTCGCC
TTCCCTGGCT TCGTGCCGGC CTATATCCGG CCGCTGTTTT GCCGCGGCAT CGGCCCCTTC
CGCTGGGCGG CCCTTTCGGG CGATCCGGAG GATATCTACA AGACCGATGC CAAGGTGAAG
GAGCTGCTGC CTGACAACAA GCACCTGCAT CATTGGCTCG ACATGGCCAG GGAGCGCATC
GCCTTCCAGG GCCTGCCGGC GCGCATCTGC TGGGTGGGCT TGGGCGACCG CCACAAGCTC
GGCCTCGCCT TCAACGAGAT GGTGAGAACA GGCGAGCTCT CCGCCCCGAT CGTCATCGGT
CGCGATCATC TGGACTCCGG CTCCGTCGCT TCGCCGAACC GCGAGACCGA AGCGATGAAG
GACGGTTCCG ACGCCGTCTC CGATTGGCCG CTGCTCAACG CCCTGCTCAA CACGGCGTCG
GGCGCCACCT GGGTGTCGCT GCATCACGGC GGCGGCGTCG GCATGGGCTT CTCGCAGCAT
TCCGGCATGG TCATTTGCGC CGATGGCACG GACGATGCCG CAAGACGCCT CGAGCGCGTG
CTCTGGAACG ACCCGGCGAC CGGTGTCATG CGCCACGCCG ATGCCGGTTA CGAGATCGCC
ATCGACTGCG CCAAGGAAAA GGGCCTGCGC CTGCCCGGCA TTCTCGGGAA CTGA
|
|---|
| Protein sequence | MSNPRHNIRE IRAPRGNDLN AKSWMTEAPL RMLMNNLDPD VAENPNELVV YGGIGRAART
WEDFDRIVAT LKTLTEEETL VVQSGKPVGV FRTHKDAPRV LIANSNLVPH WATWDHFNEL
DKKGLAMYGQ MTAGSWIYIG TQGIVQGTYE TFVEAGRQHY GGNLKGKWIL TGGLGGMGGA
QPLAAVMAGA CCLAVECNPD SIDFRLRTRY VDAKAETLDE ALEMIDRWTK AGEAKSVGLL
GNAAEILPEM VRRGIRPDIV TDQTSAHDPI NGYLPKGWTM GEWKAKRETD PKAVEKAARA
SMREHVEAMI AFWNAGVPTL DYGNNIRQVA KDEGLENAFA FPGFVPAYIR PLFCRGIGPF
RWAALSGDPE DIYKTDAKVK ELLPDNKHLH HWLDMARERI AFQGLPARIC WVGLGDRHKL
GLAFNEMVRT GELSAPIVIG RDHLDSGSVA SPNRETEAMK DGSDAVSDWP LLNALLNTAS
GATWVSLHHG GGVGMGFSQH SGMVICADGT DDAARRLERV LWNDPATGVM RHADAGYEIA
IDCAKEKGLR LPGILGN
|
|---|
| |